RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 RNF157Q96PX1 679 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 RBM15Q96T37 977 aaKnown RBP eCLIP15.29■□□□□ 0.04
CHD3-205ENST00000449744 MAK16Q9BXY0 300 aaKnown RBP15.29■□□□□ 0.04
CHD3-205ENST00000449744 SYNDIG1Q9H7V2 258 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 FGF22Q9HCT0 170 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 PHPT1Q9NRX4 125 aaPredicted RBP15.29■□□□□ 0.04
CHD3-205ENST00000449744 GOLGA6AQ9NYA3 693 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 AMACRQ9UHK6 382 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 GPR34Q9UPC5 381 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 ACACAQ13085 2346 aa15.29■□□□□ 0.04
CHD3-205ENST00000449744 APC2O95996 2303 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 A0A087WV48 116 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 NPIPB15A6NHN6 443 aaPredicted RBP15.28■□□□□ 0.04
CHD3-205ENST00000449744 TNFRSF10CO14798 259 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 RRP8O43159 456 aaKnown RBP15.28■□□□□ 0.04
CHD3-205ENST00000449744 BRINP1O60477 761 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 USP12O75317 370 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 MYCLP1P12525 358 aaPredicted RBP15.28■□□□□ 0.04
CHD3-205ENST00000449744 CCNB1P14635 433 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 LHCGRP22888 699 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 ETV3P41162 512 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 DSC2Q02487 901 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 GBE1Q04446 702 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 RBM44Q6ZP01 1051 aaKnown RBP15.28■□□□□ 0.04
CHD3-205ENST00000449744 NYAP1Q6ZVC0 841 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 HSD11B1LQ7Z5J1 315 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 TAF8Q7Z7C8 310 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 CCDC13Q8IYE1 715 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 LSMEM2Q8N112 164 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 PQLC3Q8N755 202 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 PIH1D2Q8WWB5 315 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 FATE1Q969F0 183 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 HDAC11Q96DB2 347 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 DTD2Q96FN9 168 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 MCCC1Q96RQ3 725 aaPredicted RBP15.28■□□□□ 0.04
CHD3-205ENST00000449744 CCDC3Q9BQI4 270 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 LGR4Q9BXB1 951 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 CYP4F12Q9HCS2 524 aa15.28■□□□□ 0.04
CHD3-205ENST00000449744 MRPL40Q9NQ50 206 aaKnown RBP15.28■□□□□ 0.04
CHD3-205ENST00000449744 FZD6O60353 706 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 TCEA3O75764 348 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 KRT1P04264 644 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 MPOP05164 745 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 PDHA1P08559 390 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 ABCG1P45844 678 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 GABREP78334 506 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 SPIDRQ14159 915 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 ISXQ2M1V0 245 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 RAET1GQ6H3X3 334 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 Q6ZVL8 140 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 TSPAN33Q86UF1 283 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 HEATR4Q86WZ0 1026 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 PELI3Q8N2H9 469 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 KYQ8NBH2 561 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 OR6C4Q8NGE1 309 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 LRRN4Q8WUT4 740 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 FGF11Q92914 225 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 GRAMD1AQ96CP6 724 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 TRIM5Q9C035 493 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 DTLQ9NZJ0 730 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 DNPEPQ9ULA0 475 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 INTUQ9ULD6 942 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 CHKBQ9Y259 395 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 PPIL1Q9Y3C6 166 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 HEY1Q9Y5J3 304 aa15.27■□□□□ 0.04
CHD3-205ENST00000449744 ADAMTS20P59510 1910 aa15.27■□□□□ 0.03
CHD3-205ENST00000449744 URB1O60287 2271 aaKnown RBP15.27■□□□□ 0.03
CHD3-205ENST00000449744 BAHCC1Q9P281 2608 aa15.27■□□□□ 0.03
CHD3-205ENST00000449744 A0A0J9YYE9 177 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 PRSS38A1L453 326 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 APOL1O14791 398 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 TLX3O43711 291 aaPredicted RBP15.26■□□□□ 0.03
CHD3-205ENST00000449744 MTA2O94776 668 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 TRBC1P01850 177 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 HLA-DQB2P05538 268 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 TNNT1P13805 278 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 ZFXP17010 805 aaPredicted RBP15.26■□□□□ 0.03
CHD3-205ENST00000449744 ZNF30P17039 623 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 EIF2S3P41091 472 aaKnown RBP15.26■□□□□ 0.03
CHD3-205ENST00000449744 SLC1A1P43005 524 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 GPR1P46091 355 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 SLC10A2Q12908 348 aaPredicted RBP15.26■□□□□ 0.03
CHD3-205ENST00000449744 PTPRRQ15256 657 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 TBC1D25Q3MII6 688 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 LRRC66Q68CR7 880 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 KCTD16Q68DU8 428 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 ALG1LQ6GMV1 187 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 PDZD3Q86UT5 571 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 VSIG1Q86XK7 387 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 RHOT1Q8IXI2 618 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 CBARPQ8N350 705 aaPredicted RBP15.26■□□□□ 0.03
CHD3-205ENST00000449744 FAM46DQ8NEK8 389 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 TDRD1Q9BXT4 1180 aaKnown RBP15.26■□□□□ 0.03
CHD3-205ENST00000449744 TEX101Q9BY14 249 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 TMEM168Q9H0V1 697 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 DPEP2Q9H4A9 486 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 SUDS3Q9H7L9 328 aaPredicted RBP15.26■□□□□ 0.03
CHD3-205ENST00000449744 POLR1BQ9H9Y6 1135 aa15.26■□□□□ 0.03
CHD3-205ENST00000449744 CARS2Q9HA77 564 aaKnown RBP15.26■□□□□ 0.03
CHD3-205ENST00000449744 FASNP49327 2511 aaKnown RBP15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms