RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 RTL10Q7L3V2 364 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 LPCAT2Q7L5N7 544 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 HDDC2Q7Z4H3 204 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 MILR1Q7Z6M3 343 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 IGFN1Q86VF2 1251 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 VSIG1Q86XK7 387 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 C2CD5Q86YS7 1000 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 IRF2BP1Q8IU81 584 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 WFDC3Q8IUB2 231 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 SPPL2CQ8IUH8 684 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 HERC6Q8IVU3 1022 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 CCDC36Q8IYA8 594 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PAF1Q8N7H5 531 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 MB21D1Q8N884 522 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 CATSPER1Q8NEC5 780 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PLBD2Q8NHP8 589 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 CDC26Q8NHZ8 85 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 WDR48Q8TAF3 677 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 TEX47Q8TBZ9 253 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 GANCQ8TET4 914 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PSPC1Q8WXF1 523 aaKnown RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 SEPT8Q92599 483 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 STMN2Q93045 179 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 LPPQ93052 612 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 HDAC10Q969S8 669 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 FUBP1Q96AE4 644 aaKnown RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 ISOC1Q96CN7 298 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PAGE5Q96GU1 130 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 HES6Q96HZ4 224 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 RNF170Q96K19 258 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 FAM167AQ96KS9 214 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 AK8Q96MA6 479 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF560Q96MR9 790 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PANX3Q96QZ0 392 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 BBS4Q96RK4 519 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 ERGIC2Q96RQ1 377 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 CDK5RAP1Q96SZ6 601 aaKnown RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 MNTQ99583 582 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PIP5K1AQ99755 562 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 COQ7Q99807 217 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 TSG101Q99816 390 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PTPN18Q99952 460 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 KIFC1Q9BW19 673 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 ACAT2Q9BWD1 397 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 ZNF717Q9BY31 904 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 EDEM3Q9BZQ6 932 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 DCLK3Q9C098 648 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 C6orf62Q9GZU0 229 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 BTBD1Q9H0C5 482 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 WNT5BQ9H1J7 359 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 ADNPQ9H2P0 1102 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 Q9H521 79 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 NARFLQ9H6Q4 476 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 RPF2Q9H7B2 306 aaKnown RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 NHEJ1Q9H9Q4 299 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 UGT1A7Q9HAW7 530 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 UGT1A10Q9HAW8 530 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 UGT1A8Q9HAW9 530 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 KCNK13Q9HB14 408 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 NTN4Q9HB63 628 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 MAGEE1Q9HCI5 957 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 DCP1AQ9NPI6 582 aaPredicted RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 AKIP1Q9NQ31 210 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PRDM8Q9NQV8 689 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 SEPT11Q9NVA2 429 aaKnown RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 MTPAPQ9NVV4 582 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 UCKL1Q9NWZ5 548 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 MRPL39Q9NYK5 338 aaKnown RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 HSPBP1Q9NZL4 362 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PKD2L2Q9NZM6 624 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 SLAMF8Q9P0V8 285 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 EXTL2Q9UBQ6 330 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 RWDD2AQ9UIY3 292 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 ENPP5Q9UJA9 477 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 LAMP5Q9UJQ1 280 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 APPL1Q9UKG1 709 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 AGO1Q9UL18 857 aaKnown RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 VPS4AQ9UN37 437 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 GTF2A1LQ9UNN4 478 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 WASF3Q9UPY6 502 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 PCDHA3Q9Y5H8 950 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 CFAP20Q9Y6A4 193 aaKnown RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 STON1Q9Y6Q2 735 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 DGKBQ9Y6T7 804 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 DUSP10Q9Y6W6 482 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 MYH3P11055 1940 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 ABCB11O95342 1321 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 RIMS1Q86UR5 1692 aaKnown RBP3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 RREB1Q92766 1687 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 CAMTA1Q9Y6Y1 1673 aa3.65□□□□□ -1.83
HMGB3P8-201ENST00000449709 CDK5RAP2Q96SN8 1893 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 COL15A1P39059 1388 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 SPATA31D1Q6ZQQ2 1576 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 ADAMTS13Q76LX8 1427 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 A0A0X1KG70 313 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 TMEM120BA0PK00 339 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 ISPDA4D126 451 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 WDR91A4D1P6 747 aa3.64□□□□□ -1.83
HMGB3P8-201ENST00000449709 LINC00862A6NCI5 91 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms