RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 DNASE1L3Q13609 305 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 PLEKHN1Q494U1 663 aaPredicted RBP12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 SLC30A9Q6PML9 568 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 SHC4Q6S5L8 630 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 WDCPQ9H6R7 721 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 GDPD2Q9HCC8 539 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 TRNAU1APQ9NX07 287 aaKnown RBP12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 SNX10Q9Y5X0 201 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 PCSK5Q92824 1860 aa12.59□□□□□ -0.39
AC004540.1-204ENST00000449537 PKDREJQ9NTG1 2253 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 CXorf51AA0A1B0GTR3 108 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 MYL1P05976 194 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 GLI1P08151 1106 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 CLCN1P35523 988 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 TRIM23P36406 574 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 GARSP41250 739 aaKnown RBP12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 UGT8Q16880 541 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 ATXN7L2Q5T6C5 722 aaPredicted RBP12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 ZNF761Q86XN6 746 aaPredicted RBP12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 GRAMD1CQ8IYS0 662 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 GUF1Q8N442 669 aaKnown RBP12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 NCSTNQ92542 709 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 ARHGEF2Q92974 986 aaKnown RBP12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 C1orf74Q96LT6 269 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 SLC2A13Q96QE2 648 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 LGR4Q9BXB1 951 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 TKTL2Q9H0I9 626 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 COPG2Q9UBF2 871 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 HOOK1Q9UJC3 728 aaKnown RBP12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 HPSEQ9Y251 543 aa12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 COPG1Q9Y678 874 aaKnown RBP12.58□□□□□ -0.4
AC004540.1-204ENST00000449537 ANKRD36A6QL64 1941 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 IGLV3-10A0A075B6K4 115 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 C21orf140B9A014 251 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 TEX33O43247 280 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 SRGAP2O75044 1071 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 CEACAM4O75871 244 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 KIAA0754O94854 1291 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 MAP3K6O95382 1288 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 PFKFB1P16118 471 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 SYKP43405 635 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 HDAC4P56524 1084 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 SKOR2Q2VWA4 1001 aaPredicted RBP12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 CBWD6Q4V339 395 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 CBWD3Q5JTY5 395 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 CBWD5Q5RIA9 395 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 DENND1BQ6P3S1 775 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 RASGRP3Q8IV61 690 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 ELOA2Q8IYF1 753 aaPredicted RBP12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 CT55Q8WUE5 264 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 NANOS1Q8WY41 292 aaKnown RBP12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 TIGD1Q96MW7 591 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 ACTL8Q9H568 366 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 PCDH12Q9NPG4 1184 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 ANLNQ9NQW6 1124 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 ARHGEF38Q9NXL2 777 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 KLHL3Q9UH77 587 aa12.57□□□□□ -0.4
AC004540.1-204ENST00000449537 AKAP9Q99996 3911 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 TRBV23OR9-2A0A075B6M9 112 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 HSF2BPO75031 334 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 GRAP2O75791 330 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 RECQL5O94762 991 aaPredicted RBP12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 NDUFA10O95299 355 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 NADKO95544 446 aaPredicted RBP12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 MT-ND3P03897 115 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 ETFBP38117 255 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 GNPDA1P46926 289 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 NDST2P52849 883 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 CTBSQ01459 385 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 ART3Q13508 389 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 UGP2Q16851 508 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 BRMS1LQ5PSV4 323 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 ACBD5Q5T8D3 534 aaPredicted RBP12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 TCERG1LQ5VWI1 586 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 ERAP2Q6P179 960 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 CEP57L1Q8IYX8 460 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 FDCSPQ8NFU4 85 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 HCAR2Q8TDS4 363 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 GDAP1L1Q96MZ0 367 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 GPR87Q9BY21 358 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 TTYH3Q9C0H2 523 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 WDR26Q9H7D7 661 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 LMBRD1Q9NUN5 540 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 ASNSD1Q9NWL6 643 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 SIDT1Q9NXL6 827 aaKnown RBP12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 ZNF212Q9UDV6 495 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 LNPEPQ9UIQ6 1025 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 HPCAL4Q9UM19 191 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 OSGIN2Q9Y236 505 aa12.56□□□□□ -0.4
AC004540.1-204ENST00000449537 TACC2O95359 2948 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 FUCA1P04066 466 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 SNRPB2P08579 225 aaKnown RBP12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 EPB41P11171 864 aaKnown RBP12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 ACVRL1P37023 503 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 FASLGP48023 281 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 CXCR3P49682 368 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 IL11RAQ14626 422 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 PNCKQ6P2M8 343 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 LEKR1Q6ZMV7 388 aa12.55□□□□□ -0.4
AC004540.1-204ENST00000449537 DRC7Q8IY82 874 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms