RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 ACADMP11310 421 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 LPOP22079 712 aaPredicted RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 MMP12P39900 470 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 DGKEP52429 567 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 CASP8Q14790 479 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 CNGA3Q16281 694 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 PIP5KL1Q5T9C9 394 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 AGBL4Q5VU57 503 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 ANO7Q6IWH7 933 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 TRMT10BQ6PF06 316 aaKnown RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 MICALCLQ6ZW33 695 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 DPPA4Q7L190 304 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 NLRP9Q7RTR0 991 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 PGBD3Q8N328 593 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 OR13J1Q8NGT2 312 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 FBF1Q8TES7 1133 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 EDAQ92838 391 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 SRPK1Q96SB4 655 aaKnown RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 WRAP53Q9BUR4 548 aaKnown RBP14.65□□□□□ -0.06
TNF-208ENST00000449264 CHRDQ9H2X0 955 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 TREX1Q9NSU2 369 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 PKP3Q9Y446 797 aa14.65□□□□□ -0.06
TNF-208ENST00000449264 ZNF106Q9H2Y7 1883 aaKnown RBP14.64□□□□□ -0.07
TNF-208ENST00000449264 A0A087WUV0 522 aaPredicted RBP14.64□□□□□ -0.07
TNF-208ENST00000449264 ZCWPW2A0A1B0GU75 182 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 SPINT1O43278 529 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 PIAS1O75925 651 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 ELFN1P0C7U0 828 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 GABRG2P18507 467 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 PAMP19021 973 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 STX2P32856 288 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 PDE1BQ01064 536 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 ELP6Q0PNE2 266 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 RALGDSQ12967 914 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 EFTUD2Q15029 972 aaKnown RBP eCLIP14.64□□□□□ -0.07
TNF-208ENST00000449264 CDKN3Q16667 212 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 TSTD1Q8NFU3 115 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 OR2W6PQ8NHA6 318 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 STYXQ8WUJ0 223 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 EID2BQ96D98 161 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 OSBPL6Q9BZF3 934 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 CD93Q9NPY3 652 aa14.64□□□□□ -0.07
TNF-208ENST00000449264 C20orf96Q9NUD7 363 aaPredicted RBP14.64□□□□□ -0.07
TNF-208ENST00000449264 GOLGA8KD6RF30 607 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 GOLGA8TH3BQL2 631 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 VAPBO95292 243 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 PAPSS2O95340 614 aaPredicted RBP14.63□□□□□ -0.07
TNF-208ENST00000449264 ABHD2P08910 425 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 C1SP09871 688 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 TSHRP16473 764 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 HMGCLP35914 325 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 ARSDP51689 593 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 PRAMEP78395 509 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 LONRF1Q17RB8 773 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 SKIDA1Q1XH10 827 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 SPDYCQ5MJ68 293 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 ARMC3Q5W041 872 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 CWF19L1Q69YN2 538 aaKnown RBP14.63□□□□□ -0.07
TNF-208ENST00000449264 HDXQ7Z353 690 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 FAM124AQ86V42 546 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 KCNMB4Q86W47 210 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 RASSF3Q86WH2 238 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 OR6P1Q8NGX9 317 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 CLDN23Q96B33 292 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 CERS2Q96G23 380 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 SUDS3Q9H7L9 328 aaPredicted RBP14.63□□□□□ -0.07
TNF-208ENST00000449264 NLE1Q9NVX2 485 aaPredicted RBP14.63□□□□□ -0.07
TNF-208ENST00000449264 FKBPLQ9UIM3 349 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 PLAAQ9Y263 795 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 FAM169AQ9Y6X4 670 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 ZDBF2Q9HCK1 2354 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 TRPM6Q9BX84 2022 aa14.63□□□□□ -0.07
TNF-208ENST00000449264 PRR23AA6NEV1 266 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 AREL1O15033 823 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 RPP40O75818 363 aaKnown RBP14.62□□□□□ -0.07
TNF-208ENST00000449264 SHBGP04278 402 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 GSTA2P09210 222 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 ERVK-10P10266 1014 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 ZNF30P17039 623 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 RPS9P46781 194 aaKnown RBP14.62□□□□□ -0.07
TNF-208ENST00000449264 SUOXP51687 545 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 PTSQ03393 145 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 ZBTB16Q05516 673 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 IFFO1Q0D2I5 559 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 CCDC15Q0P6D6 951 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 MTAPQ13126 283 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 KIAA0930Q6ICG6 404 aaPredicted RBP14.62□□□□□ -0.07
TNF-208ENST00000449264 OTUD6BQ8N6M0 293 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 HDAC10Q969S8 669 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 RAB7BQ96AH8 199 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 MRRFQ96E11 262 aaKnown RBP14.62□□□□□ -0.07
TNF-208ENST00000449264 TBATAQ96M53 351 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 ZNF446Q9NWS9 450 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 IL17CQ9P0M4 197 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 SLC17A6Q9P2U8 582 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 SCML1Q9UN30 329 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 FADS3Q9Y5Q0 445 aa14.62□□□□□ -0.07
TNF-208ENST00000449264 EXOC1LA0A1B0GW35 172 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 OR51F1A6NGY5 319 aa14.61□□□□□ -0.07
TNF-208ENST00000449264 ALDH1A2O94788 518 aa14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms