RNA–Protein interactions for RNA: ENST00000447995.2

PTPN12-208, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 3

Gene PTPN12, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-208	ENST00000447995	SEZ6L	Q9BYH1	1024 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	NMUR2	Q9GZQ4	415 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	TRPV6	Q9H1D0	765 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	C1orf21	Q9H246	121 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	C12orf65	Q9H3J6	166 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	SMOC2	Q9H3U7	446 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	FBXO44	Q9H4M3	255 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	UGT1A7	Q9HAW7	530 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	UGT1A10	Q9HAW8	530 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	UGT1A8	Q9HAW9	530 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	KCNK13	Q9HB14	408 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	MRM3	Q9HC36	420 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	GLOD4	Q9HC38	313 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	ENTPD7	Q9NQZ7	604 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	SNX15	Q9NRS6	342 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	TBC1D13	Q9NVG8	400 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	ARL8B	Q9NVJ2	186 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	DNAJC28	Q9NX36	388 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	SIRT5	Q9NXA8	310 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	PPARGC1A	Q9UBK2	798 aa	Known RBP	4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	TAGLN3	Q9UI15	199 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	ZMYM5	Q9UJ78	669 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	TLK1	Q9UKI8	766 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	PADI3	Q9ULW8	664 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995	MFHAS1	Q9Y4C4	1052 aa		4.1	□□□□□ -1.75
PTPN12-208	ENST00000447995		A0A087X1B8	175 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995		A0A096LPK6	155 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	ZCWPW2	A0A1B0GU75	182 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MYADML2	A6NDP7	307 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	OR6C75	A6NL08	312 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MEIS3P2	A8K0S8	358 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CAPN14	A8MX76	684 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995		B2RBV5	119 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995		F5H423	210 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	FAM72C	H0Y354	149 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	TMEM189-UBE2V1	I3L0A0	370 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	DFFA	O00273	331 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	LIN7A	O14910	233 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MATN3	O15232	486 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	SLC22A2	O15244	555 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CACNG3	O60359	315 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	GREM1	O60565	184 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PEX11A	O75192	247 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	HSPA4L	O95757	839 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PGK1	P00558	417 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	POMC	P01189	267 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	ASGR1	P07306	291 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CELA3B	P08861	270 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	ERVK-10	P10266	1014 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	FGF3	P11487	239 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	ALOX15	P16050	662 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PNLIP	P16233	465 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	HOXB8	P17481	243 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	AOC1	P19801	751 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CRABP2	P29373	138 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PRDX6	P30041	224 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CD52	P31358	61 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	GCK	P35557	465 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PGM1	P36871	562 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	SERPINB5	P36952	375 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MAGEA11	P43364	429 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	HARS2	P49590	506 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RENBP	P51606	427 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RAP1GDS1	P52306	607 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	NDST2	P52849	883 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CLNS1A	P54105	237 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	SLC12A2	P55011	1212 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RPL10A	P62906	217 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RACK1	P63244	317 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RNF4	P78317	190 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	IRX4	P78413	519 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CRADD	P78560	199 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	SMARCB1	Q12824	385 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CRHR2	Q13324	411 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	SLC12A1	Q13621	1099 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	THOC5	Q13769	683 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RCN2	Q14257	317 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	LPIN1	Q14693	890 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PCLAF	Q15004	111 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	TAF11	Q15544	211 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	VMAC	Q2NL98	169 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	TRMT5	Q32P41	509 aa	Known RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PCID2	Q5JVF3	399 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	TEDDM1	Q5T9Z0	273 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	FAM72A	Q5TYM5	149 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	METTL21C	Q5VZV1	264 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	FAM72D	Q6L9T8	149 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MSANTD2	Q6P1R3	559 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	PKN3	Q6P5Z2	889 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	KIAA0408	Q6ZU52	694 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	NET1	Q7Z628	596 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CLEC14A	Q86T13	490 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	RNF180	Q86T96	592 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	SETD3	Q86TU7	594 aa	Predicted RBP	4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	GGN	Q86UU5	652 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	MON1A	Q86VX9	555 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	FAM72B	Q86X60	149 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	FAM129C	Q86XR2	697 aa		4.09	□□□□□ -1.75
PTPN12-208	ENST00000447995	CNTN4	Q8IWV2	1026 aa		4.09	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms