RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 FTSJ1Q9UET6 329 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 CD84Q9UIB8 345 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 EFR3BQ9Y2G0 817 aa14.85□□□□□ -0.03
HDAC4-204ENST00000446876 TCRBV7S2A1N4TA0A589 114 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 HACD1B0YJ81 288 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 TRIM38O00635 465 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 PMPCBO75439 489 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 CSF2P04141 144 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 FTH1P19P0C7X4 201 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 NME1P15531 152 aaKnown RBP14.84□□□□□ -0.03
HDAC4-204ENST00000446876 JUNDP17535 347 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 SPINK2P20155 84 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 NFKBIAP25963 317 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 PMLP29590 882 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 CETN2P41208 172 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 EIF3EP60228 445 aaKnown RBP14.84□□□□□ -0.03
HDAC4-204ENST00000446876 YPEL5P62699 121 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 FOXK2Q01167 660 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 MTM1Q13496 603 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 CCDC157Q569K6 752 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 MACC1Q6ZN28 852 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 SLCO6A1Q86UG4 719 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 NDUFAF2Q8N183 169 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 CBARPQ8N350 705 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-204ENST00000446876 ZNF548Q8NEK5 533 aaPredicted RBP14.84□□□□□ -0.03
HDAC4-204ENST00000446876 FUBP1Q96AE4 644 aaKnown RBP14.84□□□□□ -0.03
HDAC4-204ENST00000446876 TADA1Q96BN2 335 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 DTD2Q96FN9 168 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 CNDP2Q96KP4 475 aaKnown RBP14.84□□□□□ -0.03
HDAC4-204ENST00000446876 TOR4AQ9NXH8 423 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 SCN8AQ9UQD0 1980 aa14.84□□□□□ -0.03
HDAC4-204ENST00000446876 GOLGA6CA6NDK9 693 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 GOLGA6BA6NDN3 693 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 TJP3O95049 919 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 CLDN7O95471 211 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 PIRTP0C851 137 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 GOLGA6DP0CG33 693 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 GIMD1P0DJR0 217 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 RBP3P10745 1247 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 PTSQ03393 145 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 DNAJC3Q13217 504 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 XRCC4Q13426 336 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 PTK2BQ14289 1009 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 NFATC4Q14934 902 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 ESRP1Q6NXG1 681 aaKnown RBP14.83□□□□□ -0.04
HDAC4-204ENST00000446876 ENPP7Q6UWV6 458 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 PID1Q7Z2X4 250 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 GLRX5Q86SX6 157 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 PHACTR4Q8IZ21 702 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 TSACCQ96A04 125 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-204ENST00000446876 IFT43Q96FT9 208 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 OXNAD1Q96HP4 312 aaPredicted RBP14.83□□□□□ -0.04
HDAC4-204ENST00000446876 CDC6Q99741 560 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 LGR4Q9BXB1 951 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 GOLGA6AQ9NYA3 693 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 APOBEC3BQ9UH17 382 aaKnown RBP14.83□□□□□ -0.04
HDAC4-204ENST00000446876 R3HDM2Q9Y2K5 976 aaKnown RBP14.83□□□□□ -0.04
HDAC4-204ENST00000446876 PPP2R2CQ9Y2T4 447 aa14.83□□□□□ -0.04
HDAC4-204ENST00000446876 PTPRBP23467 1997 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 C1orf232A0A0U1RR37 186 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 TMEM202A6NGA9 273 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 ANKRD66B4E2M5 251 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 H3BM21 787 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 PSMD11O00231 422 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 MTSS1O43312 755 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 TNFSF14O43557 240 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 SIGLEC6O43699 453 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 HYAL3O43820 417 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-204ENST00000446876 LDOC1O95751 146 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-204ENST00000446876 SLC4A1P02730 911 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 PTMAP06454 111 aaKnown RBP14.82□□□□□ -0.04
HDAC4-204ENST00000446876 CELA2BP08218 269 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-204ENST00000446876 MYF5P13349 255 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 STC1P52823 247 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 RPL26P61254 145 aaKnown RBP14.82□□□□□ -0.04
HDAC4-204ENST00000446876 HNRNPKP61978 463 aaKnown RBP eCLIP14.82□□□□□ -0.041e-10■■■■■ 35.5
HDAC4-204ENST00000446876 CDK18Q07002 472 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 C1orf61Q13536 156 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 CDKN3Q16667 212 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 ALG11Q2TAA5 492 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 FAXCQ5TGI0 409 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 PNCKQ6P2M8 343 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 DARS2Q6PI48 645 aaKnown RBP14.82□□□□□ -0.04
HDAC4-204ENST00000446876 KDELC1Q6UW63 502 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 LYSMD3Q7Z3D4 306 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 RD3Q7Z3Z2 195 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 TECPR1Q7Z6L1 1165 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 HID1Q8IV36 788 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 CDKL3Q8IVW4 592 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-204ENST00000446876 LMX1AQ8TE12 382 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 SCAMP4Q969E2 229 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 PDXPQ96GD0 296 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 WDR92Q96MX6 357 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 GORASP1Q9BQQ3 440 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 MLPHQ9BV36 600 aaPredicted RBP14.82□□□□□ -0.04
HDAC4-204ENST00000446876 LRRC61Q9BV99 259 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 ADGRE3Q9BY15 652 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 ABCG8Q9H221 673 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 RSPH14Q9UHP6 348 aa14.82□□□□□ -0.04
HDAC4-204ENST00000446876 RPL26L1Q9UNX3 145 aaKnown RBP14.82□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms