RNA–Protein interactions for RNA: ENST00000445561.5

TRO-215, Transcript of trophinin, humanhuman

TSL 1 (best)

Gene TRO, Length 2,597 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRO-215ENST00000445561 RBBP5Q15291 538 aaKnown RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 KIF19Q2TAC6 998 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 MTX3Q5HYI7 312 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 C6orf10Q5SRN2 563 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 RBM44Q6ZP01 1051 aaKnown RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 FUNDC1Q8IVP5 155 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 PTGR2Q8N8N7 351 aaPredicted RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 GABPB2Q8TAK5 448 aaPredicted RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 TRIB2Q92519 343 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 B3GALT6Q96L58 329 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 UROC1Q96N76 676 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 RPRD1AQ96P16 312 aaPredicted RBP12.62□□□□□ -0.39
TRO-215ENST00000445561 KCNA7Q96RP8 456 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 COQ10BQ9H8M1 238 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 AKTIPQ9H8T0 292 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP12.62□□□□□ -0.39
TRO-215ENST00000445561 DNAJC15Q9Y5T4 150 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 PATJQ8NI35 1801 aa12.62□□□□□ -0.39
TRO-215ENST00000445561 H3BMM5 538 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 C8BP07358 591 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 CYBAP13498 195 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 CD1DP15813 335 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 NELFEP18615 380 aaKnown RBP12.61□□□□□ -0.39
TRO-215ENST00000445561 PSMD8P48556 350 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 ARPP19P56211 112 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 HERVK_113P63132 956 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 RHDQ02161 417 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 OR4D1Q15615 310 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 PFKFB4Q16877 469 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 SLC5A9Q2M3M2 681 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 UGT3A2Q3SY77 523 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 NADK2Q4G0N4 442 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 MSANTD2Q6P1R3 559 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 RETREG3Q86VR2 466 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 HERC6Q8IVU3 1022 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 SLC25A23Q9BV35 468 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 ERVK-6Q9BXR3 956 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 CD300AQ9UGN4 299 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 CROTQ9UKG9 612 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 SARDHQ9UL12 918 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 NOD1Q9Y239 953 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.61□□□□□ -0.39
TRO-215ENST00000445561 A0A1B0GTL3 188 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 LOC285095A0A1B0GVY8 99 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 CCDC162PA2VCL2 907 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 CCDC160A6NGH7 325 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 RAMP2O60895 175 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 TNFAIP8O95379 198 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 GLP2RO95838 553 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 CAPNS1P04632 268 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 OR1E1P30953 314 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 RPL5P46777 297 aaKnown RBP12.61□□□□□ -0.39
TRO-215ENST00000445561 YBX1P67809 324 aaKnown RBP12.61□□□□□ -0.39
TRO-215ENST00000445561 GALNT1Q10472 559 aaPredicted RBP12.61□□□□□ -0.39
TRO-215ENST00000445561 KCNA10Q16322 511 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 AP1ARQ63HQ0 302 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 FAM45BPQ6NSW5 357 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 ZNF598Q86UK7 904 aaKnown RBP12.61□□□□□ -0.39
TRO-215ENST00000445561 TEX26Q8N6G2 289 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 FAM45AQ8TCE6 357 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 L3HYPDHQ96EM0 354 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 CIB1Q99828 191 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 ARHGAP39Q9C0H5 1083 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 MID1IP1Q9NPA3 183 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 TMEM181Q9P2C4 612 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 SLC27A5Q9Y2P5 690 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 COMMD3-BMI1R4GMX3 469 aa12.61□□□□□ -0.39
TRO-215ENST00000445561 SMIM31A0A1B0GVY4 71 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 ZNF839A8K0R7 811 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 NR5A2O00482 541 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 PIP5K1BO14986 540 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 CD3EAPO15446 510 aaKnown RBP12.6□□□□□ -0.39
TRO-215ENST00000445561 SRP72O76094 671 aaKnown RBP12.6□□□□□ -0.39
TRO-215ENST00000445561 CDK14O94921 469 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 FAM58BPP0C7Q3 252 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 FDXRP22570 491 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 CALRP27797 417 aaKnown RBP12.6□□□□□ -0.39
TRO-215ENST00000445561 INHBEP58166 350 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 VPS26BQ4G0F5 336 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 LARP7Q4G0J3 582 aaKnown RBP eCLIP12.6□□□□□ -0.39
TRO-215ENST00000445561 C10orf120Q5SQS8 335 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 CFAP52Q8N1V2 620 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 SLC29A1Q99808 456 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 TRIM8Q9BZR9 551 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 NOL11Q9H8H0 719 aaKnown RBP12.6□□□□□ -0.39
TRO-215ENST00000445561 SPC25Q9HBM1 224 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 DOCK4Q8N1I0 1966 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 IGLV3-10A0A075B6K4 115 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 SLC12A8A0AV02 714 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 VILLO15195 856 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 CHRM1P11229 460 aaPredicted RBP12.6□□□□□ -0.39
TRO-215ENST00000445561 GPX3P22352 226 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 STX1BP61266 288 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 LSAMPQ13449 338 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 SERINC3Q13530 473 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 GRB7Q14451 532 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 CYTH1Q15438 398 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 ARMC3Q5W041 872 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 HMBOX1Q6NT76 420 aa12.6□□□□□ -0.39
TRO-215ENST00000445561 DDIASQ8IXT1 998 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms