RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 MRPS15P82914 257 aaKnown RBP16.66■□□□□ 0.26
TCOF1-206ENST00000445265 ZNF284Q2VY69 593 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 ZIK1Q3SY52 487 aaPredicted RBP16.66■□□□□ 0.26
TCOF1-206ENST00000445265 SDHAF4Q5VUM1 108 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 FAM81AQ8TBF8 368 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 NPY6RQ99463 290 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 GPR22Q99680 433 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 HPS4Q9NQG7 708 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 SLC25A13Q9UJS0 675 aa16.66■□□□□ 0.26
TCOF1-206ENST00000445265 ANXA5P08758 320 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 FGF3P11487 239 aaPredicted RBP16.65■□□□□ 0.26
TCOF1-206ENST00000445265 NELFEP18615 380 aaKnown RBP16.65■□□□□ 0.26
TCOF1-206ENST00000445265 ABL2P42684 1182 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 THOP1P52888 689 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 ATP1A4Q13733 1029 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 ZNF460Q14592 562 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 CLEC6AQ6EIG7 209 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 FAM228AQ86W67 206 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 LEMD2Q8NC56 503 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 TBATAQ96M53 351 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 GNPTGQ9UJJ9 305 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 TOGARAM1Q9Y4F4 1720 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 TRMUO75648 421 aaKnown RBP16.65■□□□□ 0.26
TCOF1-206ENST00000445265 NDST3O95803 873 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 OCM2P0CE71 109 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 OCMP0CE72 109 aaPredicted RBP16.65■□□□□ 0.26
TCOF1-206ENST00000445265 EPB42P16452 691 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 CRY1Q16526 586 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 HECTD3Q5T447 861 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 ANKRD23Q86SG2 305 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 ZC3HC1Q86WB0 502 aaKnown RBP16.65■□□□□ 0.26
TCOF1-206ENST00000445265 STYXQ8WUJ0 223 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 LINGO1Q96FE5 620 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 PIWIL1Q96J94 861 aaKnown RBP16.65■□□□□ 0.26
TCOF1-206ENST00000445265 ZMAT2Q96NC0 199 aaKnown RBP16.65■□□□□ 0.26
TCOF1-206ENST00000445265 HAPLN3Q96S86 360 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 HMG20AQ9NP66 347 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 ARL15Q9NXU5 204 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 PRKAG2Q9UGJ0 569 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 BTBD19C9JJ37 291 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 FAM20BO75063 409 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 IGSF6O95976 241 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 PGK1P00558 417 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 LCP2Q13094 533 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 CNPY1Q3B7I2 92 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 TMPRSS4Q9NRS4 437 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 CNOT3O75175 753 aaKnown RBP16.65■□□□□ 0.26
TCOF1-206ENST00000445265 GPIP06744 558 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 NDST2P52849 883 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 DSC2Q02487 901 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 TMEM198Q66K66 360 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 FAM117BQ6P1L5 589 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 ZNF549Q6P9A3 640 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 SPPL2CQ8IUH8 684 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 PHTF2Q8N3S3 785 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 ASB8Q9H765 288 aa16.65■□□□□ 0.26
TCOF1-206ENST00000445265 AGO1Q9UL18 857 aaKnown RBP16.65■□□□□ 0.26
TCOF1-206ENST00000445265 COL22A1Q8NFW1 1626 aaPredicted RBP16.64■□□□□ 0.26
TCOF1-206ENST00000445265 LAMB1P07942 1786 aa16.64■□□□□ 0.26
TCOF1-206ENST00000445265 BCORQ6W2J9 1755 aa16.64■□□□□ 0.26
TCOF1-206ENST00000445265 F8W810 466 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 TLR5O60602 858 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 WDR47O94967 919 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 URODP06132 367 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 RXRGP48443 463 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 SELENOMQ8WWX9 145 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 STARD8Q92502 1023 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 C2orf49Q9BVC5 232 aaPredicted RBP16.64■□□□□ 0.25
TCOF1-206ENST00000445265 CCDC106Q9BWC9 280 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 OSBPL2Q9H1P3 480 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 MOCS1Q9NZB8 636 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 TEKT2Q9UIF3 430 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 PSAT1Q9Y617 370 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 PAPPAQ13219 1627 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 IGKV6-21A0A0C4DH24 114 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 EDNRBP24530 442 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.64■□□□□ 0.25
TCOF1-206ENST00000445265 TRAP1Q12931 704 aaKnown RBP16.64■□□□□ 0.25
TCOF1-206ENST00000445265 DGUOKQ16854 277 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 VPS26BQ4G0F5 336 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 SPESP1Q6UW49 350 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 TBC1D19Q8N5T2 526 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 MIPEPQ99797 713 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 RIBC2Q9H4K1 309 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 TELO2Q9Y4R8 837 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 OR6C75A6NL08 312 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 TBKBP1A7MCY6 615 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 ARHGEF9O43307 516 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 FAM189A1O60320 539 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 TOP3BO95985 862 aaKnown RBP16.64■□□□□ 0.25
TCOF1-206ENST00000445265 PKMP14618 531 aaKnown RBP16.64■□□□□ 0.25
TCOF1-206ENST00000445265 TNFAIP8L3Q5GJ75 292 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 C16orf59Q7L2K0 433 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 SATL1Q86VE3 508 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 ARRDC4Q8NCT1 418 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 FAM156AQ8NDB6 213 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 LRTOMTQ8WZ04 291 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 CEP44Q9C0F1 390 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 SLC39A8Q9C0K1 460 aa16.64■□□□□ 0.25
TCOF1-206ENST00000445265 DAPK2Q9UIK4 370 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms