RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 C9orf72Q96LT7 481 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 FCRL3Q96P31 734 aaPredicted RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 CDC42EP4Q9H3Q1 356 aaKnown RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 SEMA4AQ9H3S1 761 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 EPHX3Q9H6B9 360 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PRMT8Q9NR22 394 aaPredicted RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 ZC3H7BQ9UGR2 993 aaKnown RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 CHMP2BQ9UQN3 213 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 UQCRHLA0A096LP55 91 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 C2orf81A6NN90 581 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PSMD11O00231 422 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 TSPAN6O43657 245 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 UQCRHP07919 91 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 ACADMP11310 421 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 TDGF1P13385 188 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 H2AFXP16104 143 aaPredicted RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 LPOP22079 712 aaPredicted RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 NMBRP28336 390 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 STC1P52823 247 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 ADPRHP54922 357 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 GPX6P59796 221 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PDE1BQ01064 536 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PTPRCAPQ14761 206 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 KYNUQ16719 465 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 ANKRD20A4Q4UJ75 823 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 UBAP2Q5T6F2 1119 aaKnown RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 TSTD2Q5T7W7 516 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 CASC4Q6P4E1 433 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 KIAA1324Q6UXG2 1013 aaKnown RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 UNC5AQ6ZN44 842 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 STYXQ8WUJ0 223 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PBXIP1Q96AQ6 731 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 EPB41L4BQ9H329 900 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 NLE1Q9NVX2 485 aaPredicted RBP15.12■□□□□ 0.01
CCNE1-203ENST00000444983 SAMD15Q9P1V8 674 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 MAD1L1Q9Y6D9 718 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 FAM169AQ9Y6X4 670 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 EML5Q05BV3 1969 aa15.12■□□□□ 0.01
CCNE1-203ENST00000444983 PLXND1Q9Y4D7 1925 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 H7C0S8 307 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 TTC4O95801 387 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 POLBP06746 335 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 C1SP09871 688 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 ARNTP27540 789 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 ACSL1P33121 698 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 LIG3P49916 1009 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 FRG1Q14331 258 aaKnown RBP15.11■□□□□ 0.01
CCNE1-203ENST00000444983 ESRP1Q6NXG1 681 aaKnown RBP15.11■□□□□ 0.01
CCNE1-203ENST00000444983 CYS1Q717R9 158 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 HSD11B1LQ7Z5J1 315 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 TECPR1Q7Z6L1 1165 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 MAML2Q8IZL2 1156 aaPredicted RBP15.11■□□□□ 0.01
CCNE1-203ENST00000444983 OR13C4Q8NGS5 318 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 FUT8Q9BYC5 575 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 GPR63Q9BZJ6 419 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 KDM4CQ9H3R0 1056 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 MOCS1Q9NZB8 636 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 NINJ2Q9NZG7 142 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 BCCIPQ9P287 314 aaKnown RBP eCLIP15.11■□□□□ 0.01
CCNE1-203ENST00000444983 SLC2A6Q9UGQ3 507 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 NCKAP1Q9Y2A7 1128 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 RPS6KL1Q9Y6S9 549 aa15.11■□□□□ 0.01
CCNE1-203ENST00000444983 BUD23O43709 281 aaKnown RBP15.1■□□□□ 0.01
CCNE1-203ENST00000444983 ZNF217O75362 1048 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 C1QAP02745 245 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 TSHRP16473 764 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 SSTR1P30872 391 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 ARCN1P48444 511 aaKnown RBP15.1■□□□□ 0.01
CCNE1-203ENST00000444983 PMS2P54278 862 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 SEPT6Q14141 434 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 CRYMQ14894 314 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 AGERQ15109 404 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 SKIDA1Q1XH10 827 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 MAP7D1Q3KQU3 841 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 BEND6Q5SZJ8 279 aaPredicted RBP15.1■□□□□ 0.01
CCNE1-203ENST00000444983 NEK5Q6P3R8 708 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 CES3Q6UWW8 571 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 TRMT10CQ7L0Y3 403 aaKnown RBP15.1■□□□□ 0.01
CCNE1-203ENST00000444983 PGBD3Q8N328 593 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 FBXL6Q8N531 539 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 MREGQ8N565 214 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 OR4K2Q8NGD2 314 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 CDKN2AIPNLQ96HQ2 116 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 COQ10AQ96MF6 247 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 C11orf16Q9NQ32 467 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 NFKBIL1Q9UBC1 381 aaPredicted RBP15.1■□□□□ 0.01
CCNE1-203ENST00000444983 TRPM6Q9BX84 2022 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 DOCK9Q9BZ29 2069 aa15.1■□□□□ 0.01
CCNE1-203ENST00000444983 CCDC163A0A0D9SF12 145 aa15.09■□□□□ 0.01
CCNE1-203ENST00000444983 RGSL1A5PLK6 1076 aa15.09■□□□□ 0.01
CCNE1-203ENST00000444983 TNFRSF10AO00220 468 aa15.09■□□□□ 0.01
CCNE1-203ENST00000444983 GSTA2P09210 222 aa15.09■□□□□ 0.01
CCNE1-203ENST00000444983 SPINT3P49223 89 aa15.09■□□□□ 0.01
CCNE1-203ENST00000444983 ARSDP51689 593 aa15.09■□□□□ 0.01
CCNE1-203ENST00000444983 ARHGEF7Q14155 803 aa15.09■□□□□ 0.01
CCNE1-203ENST00000444983 UAP1Q16222 522 aaPredicted RBP15.09■□□□□ 0.01
CCNE1-203ENST00000444983 MAP9Q49MG5 647 aa15.09■□□□□ 0.01
CCNE1-203ENST00000444983 TMEM259Q4ZIN3 620 aa15.09■□□□□ 0.01
CCNE1-203ENST00000444983 KIAA0930Q6ICG6 404 aaPredicted RBP15.09■□□□□ 0.01
CCNE1-203ENST00000444983 C3orf62Q6ZUJ4 267 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms