RNA–Protein interactions for RNA: ENST00000444878.5

RBM39-216, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,124 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-216ENST00000444878 ZNF549Q6P9A3 640 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 AFTPHQ6ULP2 937 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 TMEM207Q6UWW9 146 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 Q6ZNB5 142 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 PIM3Q86V86 326 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 MAB21L3Q8N8X9 362 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 CNDP1Q96KN2 507 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 ZBP1Q9H171 429 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 C1orf21Q9H246 121 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 CYP4F12Q9HCS2 524 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 STK39Q9UEW8 545 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 SSX2IPQ9Y2D8 614 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 MTCL1Q9Y4B5 1905 aaKnown RBP13.69□□□□□ -0.22
RBM39-216ENST00000444878 GOLGA8QA0A0J9YX86 632 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 GOLGA8OA6NCC3 632 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 GOLGA8NF8WBI6 632 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 NEMP1O14524 444 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 DCXO43602 365 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 GREM1O60565 184 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 PEX11AO75192 247 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 ENTPD5O75356 428 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 BAIAP3O94812 1187 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 IPO13O94829 963 aaKnown RBP13.69□□□□□ -0.22
RBM39-216ENST00000444878 SNUPNO95149 360 aaKnown RBP13.69□□□□□ -0.22
RBM39-216ENST00000444878 WISP3O95389 354 aaPredicted RBP13.69□□□□□ -0.22
RBM39-216ENST00000444878 GM2AP17900 193 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 FDXRP22570 491 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 SERPINB5P36952 375 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 CSKP41240 450 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 RHOAP61586 193 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 TYSND1Q2T9J0 566 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 GAREM2Q75VX8 874 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 DDI1Q8WTU0 396 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 CMTM5Q96DZ9 223 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 PPP1R36Q96LQ0 422 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 OR52B2Q96RD2 323 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 NUF2Q9BZD4 464 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 RNPEPL1Q9HAU8 725 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 INTS10Q9NVR2 710 aaKnown RBP13.69□□□□□ -0.22
RBM39-216ENST00000444878 VPS51Q9UID3 782 aa13.69□□□□□ -0.22
RBM39-216ENST00000444878 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.69□□□□□ -0.22
RBM39-216ENST00000444878 UBA6A0AVT1 1052 aaPredicted RBP13.68□□□□□ -0.22
RBM39-216ENST00000444878 A8MT66 165 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 ZBBXA8MT70 800 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 KIAA0355O15063 1070 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 MAGEC1O60732 1142 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 ZNF16P17020 682 aaPredicted RBP13.68□□□□□ -0.22
RBM39-216ENST00000444878 LPOP22079 712 aaPredicted RBP13.68□□□□□ -0.22
RBM39-216ENST00000444878 PLK1P53350 603 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 COPAP53621 1224 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 TRAF2Q12933 501 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 NCEH1Q6PIU2 408 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 ACAD11Q709F0 780 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 MFN1Q8IWA4 741 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 POU5F2Q8N7G0 328 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 EFHBQ8N7U6 833 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 SMIM14Q96QK8 99 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 ALG9Q9H6U8 611 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 WDR55Q9H6Y2 383 aaPredicted RBP13.68□□□□□ -0.22
RBM39-216ENST00000444878 NOP53Q9NZM5 478 aaKnown RBP13.68□□□□□ -0.22
RBM39-216ENST00000444878 LHX3Q9UBR4 397 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 FCF1Q9Y324 198 aaKnown RBP13.68□□□□□ -0.22
RBM39-216ENST00000444878 SH3BP1Q9Y3L3 701 aa13.68□□□□□ -0.22
RBM39-216ENST00000444878 GRID2O43424 1007 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 PRSS56P0CW18 603 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 KCNA5P22460 613 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 EPHA3P29320 983 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 ABL2P42684 1182 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 PDAP1Q13442 181 aaKnown RBP13.67□□□□□ -0.22
RBM39-216ENST00000444878 MAMSTRQ6ZN01 415 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 ISCA2Q86U28 154 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 SLC22A9Q8IVM8 553 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 PHTF2Q8N3S3 785 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 FIBCD1Q8N539 461 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 DCAF4L2Q8NA75 395 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 WFDC5Q8TCV5 224 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 SH3RF2Q8TEC5 729 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 PHF21BQ96EK2 531 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 FAM161BQ96MY7 647 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 AARSD1Q9BTE6 412 aaKnown RBP13.67□□□□□ -0.22
RBM39-216ENST00000444878 THTPAQ9BU02 230 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 CCDC68Q9H2F9 335 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 GTSE1Q9NYZ3 720 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 CDYLQ9Y232 598 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 OR51B4Q9Y5P0 310 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 SEC23IPQ9Y6Y8 1000 aaKnown RBP13.67□□□□□ -0.22
RBM39-216ENST00000444878 MYO7AQ13402 2215 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 MEI4A8MW99 385 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 F8W8V4 182 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 GFRA2O00451 464 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 NDUFS3O75489 264 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 CXCL14O95715 111 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 LMNAP02545 664 aaKnown RBP13.67□□□□□ -0.22
RBM39-216ENST00000444878 C8AP07357 584 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 HNRNPLP14866 589 aaKnown RBP eCLIP13.67□□□□□ -0.22
RBM39-216ENST00000444878 EPHB1P54762 984 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 PDCD2Q16342 344 aaPredicted RBP13.67□□□□□ -0.22
RBM39-216ENST00000444878 LSM12Q3MHD2 195 aaKnown RBP13.67□□□□□ -0.22
RBM39-216ENST00000444878 SH2D4BQ5SQS7 431 aa13.67□□□□□ -0.22
RBM39-216ENST00000444878 RETSATQ6NUM9 610 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms