RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 CMTM8Q8IZV2 173 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 DNAJC5GQ8N7S2 189 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 TTC16Q8NEE8 873 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 SHKBP1Q8TBC3 707 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 SLC22A17Q8WUG5 538 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 MYO19Q96H55 970 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 MAGEE1Q9HCI5 957 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 MAN1C1Q9NR34 630 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 VTI1BQ9UEU0 232 aa15.69■□□□□ 0.1
SNX13-204ENST00000444712 ZNF106Q9H2Y7 1883 aaKnown RBP15.69■□□□□ 0.1
SNX13-204ENST00000444712 HIDE1A8MVS5 230 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 C5orf67F2Z3F1 127 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 BUD23O43709 281 aaKnown RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 DLX3O60479 287 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 WISP3O95389 354 aaPredicted RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 ESRRAP11474 423 aaPredicted RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 TTPAP49638 278 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 PFKPQ01813 784 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 PLEKHG6Q3KR16 790 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 NAPRTQ6XQN6 538 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 TPGS1Q6ZTW0 290 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 PARP9Q8IXQ6 854 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 APCDD1Q8J025 514 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 SH3RF2Q8TEC5 729 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 SLC7A6OSQ96CW6 309 aaPredicted RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 PTCD3Q96EY7 689 aaKnown RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 AARSD1Q9BTE6 412 aaKnown RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 SYTL2Q9HCH5 934 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 PNPOQ9NVS9 261 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 CRYL1Q9Y2S2 319 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 PKP3Q9Y446 797 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 COMMD10Q9Y6G5 202 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 NDUFS3O75489 264 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 PGLSO95336 258 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 PENKP01210 267 aaPredicted RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 GJA1P17302 382 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 RPL14P50914 215 aaKnown RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 BCL2L1Q07817 233 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 HSF5Q4G112 596 aaPredicted RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 PDE12Q6L8Q7 609 aaKnown RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 LDB1Q86U70 411 aaPredicted RBP15.68■□□□□ 0.1
SNX13-204ENST00000444712 KIF2BQ8N4N8 673 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 MICAL1Q8TDZ2 1067 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 BHMTQ93088 406 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.68■□□□□ 0.1
SNX13-204ENST00000444712 CNDP1Q96KN2 507 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 TBC1D14Q9P2M4 693 aa15.68■□□□□ 0.1
SNX13-204ENST00000444712 KRT16P08779 473 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 NAGLUP54802 743 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 PDAP1Q13442 181 aaKnown RBP15.67■□□□□ 0.1
SNX13-204ENST00000444712 PTPRCAPQ14761 206 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 METTL21CQ5VZV1 264 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 TTC30BQ8N4P2 665 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 AFAP1L2Q8N4X5 818 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 EFHBQ8N7U6 833 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 ZNF781Q8N8C0 355 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 ATP13A3Q9H7F0 1226 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 ARL8BQ9NVJ2 186 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 SDAD1Q9NVU7 687 aaKnown RBP eCLIP15.67■□□□□ 0.1
SNX13-204ENST00000444712 POLR3BQ9NW08 1133 aaPredicted RBP15.67■□□□□ 0.1
SNX13-204ENST00000444712 ZNF711Q9Y462 761 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 PCDHB9Q9Y5E1 797 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 NUMBLQ9Y6R0 609 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 LCHNA4D1U4 455 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 LINC01553A4QN01 128 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 CAPN14A8MX76 684 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 PYGLP06737 847 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 RHOP08100 348 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 POU2F2P09086 479 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 TCF3P15923 654 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 CD9P21926 228 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 ARRB2P32121 409 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 PPARGP37231 505 aaPredicted RBP15.67■□□□□ 0.1
SNX13-204ENST00000444712 ABL2P42684 1182 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 IDH3AP50213 366 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 CDKN2DP55273 166 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 SNRPD1P62314 119 aaKnown RBP15.67■□□□□ 0.1
SNX13-204ENST00000444712 SEMA3AQ14563 771 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 SNCBQ16143 134 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 STK40Q8N2I9 435 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 ISG20Q96AZ6 181 aaKnown RBP15.67■□□□□ 0.1
SNX13-204ENST00000444712 EBF4Q9BQW3 602 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 BTBD10Q9BSF8 475 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 GPR63Q9BZJ6 419 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 POMKQ9H5K3 350 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 TLE6Q9H808 572 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 EML4Q9HC35 981 aaKnown RBP15.67■□□□□ 0.1
SNX13-204ENST00000444712 TDP1Q9NUW8 608 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 HCFC1R1Q9NWW0 138 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 TAS2R13Q9NYV9 303 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 TRIM33Q9UPN9 1127 aa15.67■□□□□ 0.1
SNX13-204ENST00000444712 UBA6A0AVT1 1052 aaPredicted RBP15.66■□□□□ 0.1
SNX13-204ENST00000444712 CCDC189A1A4V9 331 aa15.66■□□□□ 0.1
SNX13-204ENST00000444712 GOLGA8CPA6NN73 597 aa15.66■□□□□ 0.1
SNX13-204ENST00000444712 ZNF195O14628 629 aa15.66■□□□□ 0.1
SNX13-204ENST00000444712 GRM6O15303 877 aa15.66■□□□□ 0.1
SNX13-204ENST00000444712 HDAC3O15379 428 aa15.66■□□□□ 0.1
SNX13-204ENST00000444712 HTRA2O43464 458 aaPredicted RBP15.66■□□□□ 0.1
SNX13-204ENST00000444712 IPO13O94829 963 aaKnown RBP15.66■□□□□ 0.1
SNX13-204ENST00000444712 PIGNO95427 931 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms