RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 PPM1EQ8WY54 764 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 CHFRQ96EP1 664 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 CDKN2AIPNLQ96HQ2 116 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 VPS39Q96JC1 886 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 OSBPL1AQ9BXW6 950 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 IQCGQ9H095 443 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 RHOJQ9H4E5 214 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZFYVE1Q9HBF4 777 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 BPIFA1Q9NP55 256 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 INTS9Q9NV88 658 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 PHTF1Q9UMS5 762 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 RRP15Q9Y3B9 282 aaKnown RBP9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 WASF2Q9Y6W5 498 aa9.52□□□□□ -0.89
SMPD4P1-203ENST00000443839 EDDM13A0A1B0GTR0 161 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 A6NNZ2 444 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 A8MX80 341 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 C2CD4DB7Z1M9 353 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 MYO1CO00159 1063 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 TPP1O14773 563 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 PRPF4O43172 522 aaKnown RBP eCLIP9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 RFPL1O75677 317 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 ALDOAP04075 364 aaKnown RBP9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 HLA-EP13747 358 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 HMGCLP35914 325 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 HADHAP40939 763 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 GNGT1P63211 74 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 SEPT7Q16181 437 aaKnown RBP9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 HNRNPA1L2Q32P51 320 aaKnown RBP9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 TUBB8Q3ZCM7 444 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 BRAT1Q6PJG6 821 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 AFTPHQ6ULP2 937 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 TAX1BP1Q86VP1 789 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZC3HC1Q86WB0 502 aaKnown RBP9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 CILP2Q8IUL8 1156 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 TTC30BQ8N4P2 665 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 DCLK2Q8N568 766 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 C2CD4AQ8NCU7 369 aaPredicted RBP9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 OR4L1Q8NH43 312 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 DYDC1Q8WWB3 177 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 VOPP1Q96AW1 172 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 LRIG1Q96JA1 1093 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 MLXIPLQ9NP71 852 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 SSU72Q9NP77 194 aaKnown RBP9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 CATSPERZQ9NTU4 200 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 PCMTD2Q9NV79 361 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 TICRRQ7Z2Z1 1910 aa9.51□□□□□ -0.89
SMPD4P1-203ENST00000443839 NPIPB15A6NHN6 443 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 COPEO14579 308 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 CD3EAPO15446 510 aaKnown RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 MBTPS2O43462 519 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 TYROBPO43914 113 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 AHSGP02765 367 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SAT1P21673 171 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 XPAP23025 273 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 PMLP29590 882 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 TYK2P29597 1187 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 RPA3P35244 121 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 CD151P48509 253 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SERPINB8P50452 374 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 MPP2Q14168 576 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 ELAVL3Q14576 367 aaKnown RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 LRRC14Q15048 493 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 FASTKD1Q53R41 847 aaKnown RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 LRRC73Q5JTD7 316 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 TIFABQ6ZNK6 161 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 MICALCLQ6ZW33 695 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 Q7L0L9 218 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SDCCAG8Q86SQ7 713 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 BANPQ8N9N5 519 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 OR8D1Q8WZ84 308 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SCRN2Q96FV2 425 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 APOPT1Q96IL0 206 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SLC13A1Q9BZW2 595 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 FBXO6Q9NRD1 293 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 MARCH4Q9P2E8 410 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 FKBPLQ9UIM3 349 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 COL6A3P12111 3177 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 TCF20Q9UGU0 1960 aaKnown RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 KPNA3O00505 521 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZWINTO95229 277 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 CLDN7O95471 211 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 PRNPP04156 253 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 CTSLP07711 333 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 FOSL2P15408 326 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 NFKBIAP25963 317 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 GABRB3P28472 473 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 MC4RP32245 332 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SLC18A1P54219 525 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SEMG2Q02383 582 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 SLC18A2Q05940 514 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 POM121L1PQ3SYA9 428 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 ZNF805Q5CZA5 627 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 TPRG1Q6ZUI0 275 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 LDB1Q86U70 411 aaPredicted RBP9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 CHPFQ8IZ52 775 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 STK40Q8N2I9 435 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 EFCAB3Q8N7B9 438 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 GPATCH11Q8N954 259 aa9.5□□□□□ -0.89
SMPD4P1-203ENST00000443839 TCP10LQ8TDR4 215 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms