RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 ARL4CP56559 192 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 NIPAL4Q0D2K0 466 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 KLHL38Q2WGJ6 581 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 PRAMEF14Q5SWL7 426 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 OTUD1Q5VV17 481 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 STRADAQ7RTN6 431 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZC3H18Q86VM9 953 aaKnown RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 OR2T3Q8NH03 318 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 PIP4K2CQ8TBX8 421 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF483Q8TF39 744 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SKA2Q8WVK7 121 aaPredicted RBP7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 DYDC1Q8WWB3 177 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 RSPRY1Q96DX4 576 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 OLFM3Q96PB7 478 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 ACOX2Q99424 681 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 IER2Q9BTL4 223 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 GPR63Q9BZJ6 419 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 MTG2Q9H4K7 406 aa7.42□□□□□ -1.22
CDC42BPA-208ENST00000442054 SDR42E2A6NKP2 422 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 GOLGA8MH3BSY2 632 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 APOL1O14791 398 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 FGF10O15520 208 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 FOXD2O60548 495 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 OPHN1O60890 802 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 MOSPD3O75425 235 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 ALPPL2P10696 532 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 AMPD1P23109 780 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 KCNC3Q14003 757 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 SEPT6Q14141 434 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 PM20D1Q6GTS8 502 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 CASC4Q6P4E1 433 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 BMP8AQ7Z5Y6 402 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 LZTR1Q8N653 840 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 TEX9Q8N6V9 391 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 NETO2Q8NC67 525 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 MCUQ8NE86 351 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 PCDH19Q8TAB3 1148 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 RHBDD1Q8TEB9 315 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 EDEM2Q9BV94 578 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 TMEM120AQ9BXJ8 343 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 POLR3BQ9NW08 1133 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 IRAK4Q9NWZ3 460 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 EVLQ9UI08 416 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 XPO7Q9UIA9 1087 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 STK38LQ9Y2H1 464 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 FCF1Q9Y324 198 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 PCDHGA2Q9Y5H1 932 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 TNFRSF10BO14763 440 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 CHRNB1P11230 501 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 RHOQP17081 205 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 SERPINB3P29508 390 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 CD6P30203 668 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 CD70P32970 193 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 STK19P49842 368 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 NOVA1P51513 510 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 OVGP1Q12889 678 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 HNRNPDQ14103 355 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 FSTL4Q6MZW2 842 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 SYT13Q7L8C5 426 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAM160A2Q8N612 972 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 FAM71DQ8N9W8 422 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 TTC13Q8NBP0 860 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 GIMAP7Q8NHV1 300 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 RAB3IL1Q8TBN0 382 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 RNF157Q96PX1 679 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 NMUR2Q9GZQ4 415 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 C1orf21Q9H246 121 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 STN1Q9H668 368 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 ATP13A3Q9H7F0 1226 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 DCLRE1BQ9H816 532 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF395Q9H8N7 513 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 TRPV4Q9HBA0 871 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 PIGVQ9NUD9 493 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 RBM22Q9NW64 420 aaKnown RBP eCLIP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 AKAP7Q9P0M2 348 aaPredicted RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 STX18Q9P2W9 335 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 RANBP2P49792 3224 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 PRR5-ARHGAP8B1AHC4 643 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 LRIG2O94898 1065 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 MPLP40238 635 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 GTF2H3Q13889 308 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 CA9Q16790 459 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 ZNF284Q2VY69 593 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 ARSIQ5FYB1 569 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 PGM2L1Q6PCE3 622 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 ARCQ7LC44 396 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 LRRC8CQ8TDW0 803 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 TEKT4Q8WW24 435 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 SORT1Q99523 831 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 TRIM56Q9BRZ2 755 aaKnown RBP7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 TMEM30AQ9NV96 361 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 OSER1Q9NX31 292 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 HEY2Q9UBP5 337 aa7.41□□□□□ -1.22
CDC42BPA-208ENST00000442054 SIN3BO75182 1162 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 SKAP2O75563 359 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 LATS1O95835 1130 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 JCHAINP01591 159 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 ERCC2P18074 760 aa7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 TFE3P19532 575 aaPredicted RBP7.4□□□□□ -1.22
CDC42BPA-208ENST00000442054 BGNP21810 368 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms