RNA–Protein interactions for RNA: ENST00000441725.1

CDC42BPA-207, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 2,183 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-207ENST00000441725 SARNPP82979 210 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SLC25A3Q00325 362 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 C15orf59Q2T9L4 293 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 AWAT1Q58HT5 328 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 PCID2Q5JVF3 399 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 FBXO42Q6P3S6 717 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 CCDC13Q8IYE1 715 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 PAQR4Q8N4S7 273 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 FAM184AQ8NB25 1140 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 CNDP1Q96KN2 507 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 RAB3IPQ96QF0 476 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 FRG2BQ96QU4 278 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 PI4K2AQ9BTU6 479 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 CAPS2Q9BXY5 557 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 COPS7BQ9H9Q2 264 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 GAR1Q9NY12 217 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SH3BGRL2Q9UJC5 107 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TUBE1Q9UJT0 475 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 AGTPBP1Q9UPW5 1226 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 CMAHPQ9Y471 501 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 AKNAQ7Z591 1439 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SPATA31A5Q5VU36 1347 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SPATA31A6Q5VVP1 1343 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SPATA31A7Q8IWB4 1347 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 CENPVL1A0A0U1RR11 272 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 CXorf65A6NEN9 183 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 CASQ2O14958 399 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SLC25A17O43808 307 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SOCS5O75159 536 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 STAM2O75886 525 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SLCO2B1O94956 709 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 P4HA1P13674 534 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 RPS2P15880 293 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM11P17152 192 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 HSPA1LP34931 641 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 KRT2P35908 639 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 NPY4RP50391 375 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 CYP2J2P51589 502 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SLC18A2Q05940 514 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 ACSM2AQ08AH3 577 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 KLHL30Q0D2K2 578 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TNIP1Q15025 636 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 NAB2Q15742 525 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 ANKDD1AQ495B1 522 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 CST9LP1Q5W188 147 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 KRT79Q5XKE5 535 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM198Q66K66 360 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 ACSM2BQ68CK6 577 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 IYDQ6PHW0 289 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 RBPMS2Q6ZRY4 209 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SEPT14Q6ZU15 432 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TBC1D26Q86UD7 250 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 WDR5BQ86VZ2 330 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TERB1Q8NA31 727 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 PTPMT1Q8WUK0 201 aaPredicted RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM170AQ8WVE7 144 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 SGCDQ92629 289 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 PTP4A1Q93096 173 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 LRRC59Q96AG4 307 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TOX2Q96NM4 488 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 RBM14Q96PK6 669 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM237Q96Q45 408 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TEFMQ96QE5 360 aaKnown RBP4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 AGAP2Q99490 1192 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 TSPYL1Q9H0U9 437 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 ANKFY1Q9P2R3 1169 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 FBXO40Q9UH90 709 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 COG5Q9UP83 839 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 LAMC3Q9Y6N6 1575 aa4.17□□□□□ -1.74
CDC42BPA-207ENST00000441725 A0A1B0GVM2 712 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM247A6NEH6 219 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 LRRC72A6NJI9 287 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 LINC00473A8K010 186 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 INO80B-WBP1J3KQ70 363 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 PSMA7O14818 248 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 NEMFO60524 1076 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 KINO60870 393 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 MT-CYBP00156 380 aaPredicted RBP4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 HOXB5P09067 269 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 ELFN1P0C7U0 828 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 STMN1P16949 149 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 ZNF24P17028 368 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 CD9P21926 228 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 ACRV1P26436 265 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 CENPAP49450 140 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 CCR3P51677 355 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 CYP4F2P78329 520 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 ICAM4Q14773 271 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 LARS2Q15031 903 aaKnown RBP4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 ARHGEF6Q15052 776 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 HYAL4Q2M3T9 481 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 PCGF3Q3KNV8 242 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 PLK5Q496M5 336 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 KRTCAP3Q53RY4 240 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 ODF2Q5BJF6 829 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 COLEC12Q5KU26 742 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM268Q5VZI3 342 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 RAB12Q6IQ22 244 aa4.16□□□□□ -1.74
CDC42BPA-207ENST00000441725 TMEM65Q6PI78 240 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms