RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 RBM23Q86U06 439 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 OR13C4Q8NGS5 318 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 C10orf82Q8WW14 230 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ING5Q8WYH8 240 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 CCT6BQ92526 530 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 ULK4Q96C45 1275 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 LRIG1Q96JA1 1093 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 RILPQ96NA2 401 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 RAB3IPQ96QF0 476 aaPredicted RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 AARSD1Q9BTE6 412 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 TMEM120AQ9BXJ8 343 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 OSBPL1AQ9BXW6 950 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 CPEB1Q9BZB8 566 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 SMG9Q9H0W8 520 aaKnown RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 MRGBPQ9NV56 204 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 POLR3BQ9NW08 1133 aaPredicted RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 GDE1Q9NZC3 331 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 HECAQ9UBI9 543 aaPredicted RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 DCTN4Q9UJW0 460 aa6.03□□□□□ -1.44
VPS50-205ENST00000441602 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.03□□□□□ -1.44
VPS50-205ENST00000441602 PABPN1LA6NDY0 278 aaKnown RBP6.02□□□□□ -1.44
VPS50-205ENST00000441602 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.02□□□□□ -1.44
VPS50-205ENST00000441602 E5RI56 91 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 H7C0S8 307 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 MOSPD3O75425 235 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 S100BP04271 92 aaPredicted RBP6.02□□□□□ -1.44
VPS50-205ENST00000441602 SRCP12931 536 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 PKMP14618 531 aaKnown RBP6.02□□□□□ -1.44
VPS50-205ENST00000441602 CCR2P41597 374 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 PTGER3P43115 390 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 MAGEA10P43363 369 aaPredicted RBP6.02□□□□□ -1.44
VPS50-205ENST00000441602 DGKGP49619 791 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 RGS4P49798 205 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 ARSDP51689 593 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 NTHL1P78549 312 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 SF3A3Q12874 501 aaKnown RBP eCLIP6.02□□□□□ -1.44
VPS50-205ENST00000441602 MSLNQ13421 630 aaPredicted RBP6.02□□□□□ -1.44
VPS50-205ENST00000441602 ITGA9Q13797 1035 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 CSHL1Q14406 222 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 ACAP2Q15057 778 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 SHHQ15465 462 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 GPR33Q49SQ1 333 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 PIWIL4Q7Z3Z4 852 aaKnown RBP6.02□□□□□ -1.44
VPS50-205ENST00000441602 TMEM25Q86YD3 366 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 TTC30BQ8N4P2 665 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 CPA6Q8N4T0 437 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 VN1R2Q8NFZ6 395 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 SMARCD2Q92925 531 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 HEPHQ9BQS7 1158 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 CLPBQ9H078 707 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 ILKAPQ9H0C8 392 aaPredicted RBP6.02□□□□□ -1.44
VPS50-205ENST00000441602 NKX2-4Q9H2Z4 354 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 C12orf65Q9H3J6 166 aaKnown RBP6.02□□□□□ -1.44
VPS50-205ENST00000441602 SUV39H2Q9H5I1 410 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 ZFYVE1Q9HBF4 777 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 PFDN4Q9NQP4 134 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 SAR1AQ9NR31 198 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 PKD2L2Q9NZM6 624 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 VTI1BQ9UEU0 232 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 CRLS1Q9UJA2 301 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 SORCS3Q9UPU3 1222 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 DNAJC16Q9Y2G8 782 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 KCTD3Q9Y597 815 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 SPO11Q9Y5K1 396 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 WNT6Q9Y6F9 365 aa6.02□□□□□ -1.44
VPS50-205ENST00000441602 A0A0J9YYE9 177 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 CAPN8A6NHC0 703 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 SYCE1LA8MT33 242 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 PER2O15055 1255 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 HOXC11O43248 304 aaPredicted RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 HTRA2O43464 458 aaPredicted RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 BNIP3LO60238 219 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 FZD6O60353 706 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 NPHS1O60500 1241 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 FSBPO95073 299 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 TRBC1P01850 177 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ESR1P03372 595 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 SLC35E2BP0CK96 405 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 TPBGLP0DKB5 382 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 KCNA4P22459 653 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 SPAM1P38567 509 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 MAGEA9P43362 315 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 VASPP50552 380 aaPredicted RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 OCRLQ01968 901 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ACTN3Q08043 901 aaPredicted RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 OVGP1Q12889 678 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 PCLAFQ15004 111 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 DLG2Q15700 870 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 RARS2Q5T160 578 aaKnown RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 PTRHD1Q6GMV3 140 aaKnown RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 BRAT1Q6PJG6 821 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 C10orf107Q8IVU9 208 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 SUGP1Q8IWZ8 645 aaKnown RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 CBARPQ8N350 705 aaPredicted RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 MICALL1Q8N3F8 863 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 PIWIL2Q8TC59 973 aaKnown RBP6.02□□□□□ -1.45
VPS50-205ENST00000441602 WFDC5Q8TCV5 224 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 OSCP1Q8WVF1 389 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 PBXIP1Q96AQ6 731 aa6.02□□□□□ -1.45
VPS50-205ENST00000441602 ZNF707Q96C28 371 aaPredicted RBP6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms