RNA–Protein interactions for RNA: ENST00000441580.5

CPSF4-206, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2 BASIC

Gene CPSF4, Length 942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-206ENST00000441580 RNF135Q8IUD6 432 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 STK40Q8N2I9 435 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 TTC30BQ8N4P2 665 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 EFHBQ8N7U6 833 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 OR4K2Q8NGD2 314 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 HEXDCQ8WVB3 486 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 ISG20Q96AZ6 181 aaKnown RBP13.18□□□□□ -0.3
CPSF4-206ENST00000441580 NXNL1Q96CM4 212 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 CDKN2AIPNLQ96HQ2 116 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 AARSD1Q9BTE6 412 aaKnown RBP13.18□□□□□ -0.3
CPSF4-206ENST00000441580 GATA5Q9BWX5 397 aaPredicted RBP13.18□□□□□ -0.3
CPSF4-206ENST00000441580 CEP44Q9C0F1 390 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 MAGEE1Q9HCI5 957 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 ARHGEF3Q9NR81 526 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 NCKIPSDQ9NZQ3 722 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 CPSF2Q9P2I0 782 aaKnown RBP13.18□□□□□ -0.3
CPSF4-206ENST00000441580 RAP2CQ9Y3L5 183 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 PKP3Q9Y446 797 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 PCDHGC4Q9Y5F7 938 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 SCN8AQ9UQD0 1980 aa13.18□□□□□ -0.3
CPSF4-206ENST00000441580 A0A1W2PQ67 120 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 GOLGA8CPA6NN73 597 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 ZNF197O14709 1029 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 SLC9A3R1O14745 358 aaPredicted RBP13.17□□□□□ -0.3
CPSF4-206ENST00000441580 HTRA2O43464 458 aaPredicted RBP13.17□□□□□ -0.3
CPSF4-206ENST00000441580 SLC4A1P02730 911 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 PYGLP06737 847 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 KITP10721 976 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 GJA1P17302 382 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 CD9P21926 228 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 SERPINA4P29622 427 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 GMPRP36959 345 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 CCR2P41597 374 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 SNRPD1P62314 119 aaKnown RBP13.17□□□□□ -0.3
CPSF4-206ENST00000441580 NFKB2Q00653 900 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 BCL2L1Q07817 233 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 DLG1Q12959 904 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 PDAP1Q13442 181 aaKnown RBP13.17□□□□□ -0.3
CPSF4-206ENST00000441580 ZNF77Q15935 545 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 CTC1Q2NKJ3 1217 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 ZNF789Q5FWF6 425 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 ATXN7L2Q5T6C5 722 aaPredicted RBP13.17□□□□□ -0.3
CPSF4-206ENST00000441580 C22orf39Q6P5X5 142 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 CYB5D1Q6P9G0 228 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 TPGS1Q6ZTW0 290 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 APCDD1Q8J025 514 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 PCDH20Q8N6Y1 951 aaKnown RBP13.17□□□□□ -0.3
CPSF4-206ENST00000441580 TTC16Q8NEE8 873 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 MDGA1Q8NFP4 955 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 OR2AP1Q8NGE2 309 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 MICAL1Q8TDZ2 1067 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 LPGAT1Q92604 370 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 UBXN10Q96LJ8 280 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 RILPQ96NA2 401 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 LBHD1Q9BQE6 289 aaPredicted RBP13.17□□□□□ -0.3
CPSF4-206ENST00000441580 C17orf80Q9BSJ5 609 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 TM6SF2Q9BZW4 377 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 C20orf27Q9GZN8 174 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 NMUR2Q9GZQ4 415 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 ILKAPQ9H0C8 392 aaPredicted RBP13.17□□□□□ -0.3
CPSF4-206ENST00000441580 HCFC1R1Q9NWW0 138 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 MARK1Q9P0L2 795 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 VTI1BQ9UEU0 232 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 HS3ST2Q9Y278 367 aa13.17□□□□□ -0.3
CPSF4-206ENST00000441580 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.17□□□□□ -0.3
CPSF4-206ENST00000441580 GBF1Q92538 1859 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 CAPN8A6NHC0 703 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-206ENST00000441580 CLASP2O75122 1294 aaKnown RBP13.16□□□□□ -0.3
CPSF4-206ENST00000441580 NDUFS3O75489 264 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 CBX6O95503 412 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 PDHA1P08559 390 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 SBK3P0C264 359 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 CCDC166P0CW27 439 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 ZNF37AP17032 561 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-206ENST00000441580 EN2P19622 333 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-206ENST00000441580 PTPN4P29074 926 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 MC4RP32245 332 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 CD70P32970 193 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 PPARGP37231 505 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-206ENST00000441580 ADARP55265 1226 aaKnown RBP13.16□□□□□ -0.3
CPSF4-206ENST00000441580 NAA20P61599 178 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 CACNG1Q06432 222 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 FUT11Q495W5 492 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 PRSS36Q5K4E3 855 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 ALYREFQ86V81 257 aaKnown RBP13.16□□□□□ -0.3
CPSF4-206ENST00000441580 TMEM151AQ8N4L1 468 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 PAF1Q8N7H5 531 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 BHMTQ93088 406 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 PTCD3Q96EY7 689 aaKnown RBP13.16□□□□□ -0.3
CPSF4-206ENST00000441580 FAR2Q96K12 515 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 LMLNQ96KR4 655 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 NSMCE3Q96MG7 304 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 TRMOQ9BU70 441 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 HTATIP2Q9BUP3 242 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 GPR63Q9BZJ6 419 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 POMKQ9H5K3 350 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 SUDS3Q9H7L9 328 aaPredicted RBP13.16□□□□□ -0.3
CPSF4-206ENST00000441580 SYTL2Q9HCH5 934 aa13.16□□□□□ -0.3
CPSF4-206ENST00000441580 TDP1Q9NUW8 608 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms