RNA–Protein interactions for RNA: ENST00000439765.3

CCDC188-201, Transcript of coiled-coil domain containing 188, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CCDC188, Length 1,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188-201ENST00000439765 A0A1W2PQ67 120 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 F5H423 210 aaPredicted RBP17.73■□□□□ 0.43
CCDC188-201ENST00000439765 LZTS3O60299 673 aaPredicted RBP17.73■□□□□ 0.43
CCDC188-201ENST00000439765 PCDHGA12O60330 932 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 ALPIP09923 528 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 CA4P22748 312 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 CES1P23141 567 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 IGFALSP35858 605 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 SKOR1P84550 965 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 CKAP4Q07065 602 aaKnown RBP17.73■□□□□ 0.43
CCDC188-201ENST00000439765 WASHC5Q12768 1159 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 IRF4Q15306 451 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 TEX44Q53QW1 395 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 KYAT3Q6YP21 454 aaKnown RBP17.73■□□□□ 0.43
CCDC188-201ENST00000439765 USP45Q70EL2 814 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 ABI3BPQ7Z7G0 1075 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 IQCHQ86VS3 1027 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 SPATS2Q86XZ4 545 aaKnown RBP17.73■□□□□ 0.43
CCDC188-201ENST00000439765 SLC22A18ASQ8N1D0 253 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 CHCHD4Q8N4Q1 142 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 LPCAT1Q8NF37 534 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 SETD7Q8WTS6 366 aaKnown RBP17.73■□□□□ 0.43
CCDC188-201ENST00000439765 HTR3CQ8WXA8 447 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 SMIM14Q96QK8 99 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 C1QTNF7Q9BXJ2 289 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 AP1M1Q9BXS5 423 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 KLHL8Q9P2G9 620 aaPredicted RBP17.73■□□□□ 0.43
CCDC188-201ENST00000439765 PHTF1Q9UMS5 762 aa17.73■□□□□ 0.43
CCDC188-201ENST00000439765 R3HDM2Q9Y2K5 976 aaKnown RBP17.73■□□□□ 0.43
CCDC188-201ENST00000439765 SCN8AQ9UQD0 1980 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 HACD1B0YJ81 288 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 FPGTO14772 594 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 MTSS1O43312 755 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 FZD6O60353 706 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 LHCGRP22888 699 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 CCT8P50990 548 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 EPHB1P54762 984 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 EIF3EP60228 445 aaKnown RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 OVGP1Q12889 678 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 SUZ12Q15022 739 aaKnown RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 CNGA3Q16281 694 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 PCSK7Q16549 785 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 DENND2CQ68D51 928 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 LIPIQ6XZB0 460 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 Q6ZSR6 202 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 ZNF572Q7Z3I7 529 aaPredicted RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 PRELID2Q8N945 189 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 TP53I13Q8NBR0 393 aaPredicted RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 DENND6BQ8NEG7 585 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 PIH1D2Q8WWB5 315 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 CENPTQ96BT3 561 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 IMP4Q96G21 291 aaKnown RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 BMFQ96LC9 184 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 LENG8Q96PV6 779 aaPredicted RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 ELF4Q99607 663 aaPredicted RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 FRMD8P1Q9BZ68 369 aaPredicted RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 PCDH9Q9HC56 1237 aa17.72■□□□□ 0.43
CCDC188-201ENST00000439765 MBNL1Q9NR56 388 aaKnown RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 APOBEC2Q9Y235 224 aaKnown RBP17.72■□□□□ 0.43
CCDC188-201ENST00000439765 MYLKQ15746 1914 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 DMXL2Q8TDJ6 3036 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 A0A0U1RQS6 177 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 DFNA5O60443 496 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 MT-CYBP00156 380 aaPredicted RBP17.71■□□□□ 0.43
CCDC188-201ENST00000439765 RBP3P10745 1247 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 RBL1P28749 1068 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 VIPR1P32241 457 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 XRCC4Q13426 336 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 ACOX1Q15067 660 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 CCNG2Q16589 344 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 TSPAN33Q86UF1 283 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 CDKL3Q8IVW4 592 aaPredicted RBP17.71■□□□□ 0.43
CCDC188-201ENST00000439765 ZNF567Q8N184 647 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 SPATA4Q8NEY3 305 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 SPATA22Q8NHS9 363 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 C1orf54Q8WWF1 131 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 ASB12Q8WXK4 309 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 TEKT5Q96M29 485 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 CDC6Q99741 560 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 SLC25A51Q9H1U9 297 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 GLOD4Q9HC38 313 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 HOMER3Q9NSC5 361 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 UBP1Q9NZI7 540 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 ZMIZ1Q9ULJ6 1067 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 WDFY3Q8IZQ1 3526 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 ZFYVE26Q68DK2 2539 aa17.71■□□□□ 0.43
CCDC188-201ENST00000439765 GOLGA6L10A0A0M3HER8 536 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 MAGEC1O60732 1142 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 RECQL5O94762 991 aaPredicted RBP17.7■□□□□ 0.42
CCDC188-201ENST00000439765 DKK1O94907 266 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 PRLP01236 227 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 PCCBP05166 539 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 CYP2A6P11509 494 aaPredicted RBP17.7■□□□□ 0.42
CCDC188-201ENST00000439765 NFKB1P19838 968 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 NFKBIAP25963 317 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 CD68P34810 354 aaPredicted RBP17.7■□□□□ 0.42
CCDC188-201ENST00000439765 GALNT3Q14435 633 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 LRRC14Q15048 493 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 CYP1B1Q16678 543 aa17.7■□□□□ 0.42
CCDC188-201ENST00000439765 WSCD2Q2TBF2 565 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms