RNA–Protein interactions for RNA: ENST00000439717.2

HSPG2-206, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 637 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-206ENST00000439717 HOXC4P09017 264 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-206ENST00000439717 CSRP1P21291 193 aaKnown RBP11.82□□□□□ -0.52
HSPG2-206ENST00000439717 STC1P52823 247 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 THOP1P52888 689 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 DPTQ07507 201 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 PDE1CQ14123 709 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-206ENST00000439717 GALNT3Q14435 633 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 INPP5AQ14642 412 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 PTPRRQ15256 657 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 SHBQ15464 509 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 OASLQ15646 514 aaKnown RBP11.82□□□□□ -0.52
HSPG2-206ENST00000439717 CCNG2Q16589 344 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 CDKN3Q16667 212 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 P3H1Q32P28 736 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 DENND2CQ68D51 928 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 DRICH1Q6PGQ1 229 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-206ENST00000439717 MACC1Q6ZN28 852 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 ZNF765Q7L2R6 523 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 HSD11B1LQ7Z5J1 315 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 TECPR1Q7Z6L1 1165 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 PIP4P1Q86T03 277 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 NLRP8Q86W28 1048 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 NRSN1Q8IZ57 195 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 SLC35F6Q8N357 371 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 FAM71DQ8N9W8 422 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 ATL2Q8NHH9 583 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 CCDC110Q8TBZ0 833 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 CCHCR1Q8TD31 782 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 RTP4Q96DX8 246 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 OXNAD1Q96HP4 312 aaPredicted RBP11.82□□□□□ -0.52
HSPG2-206ENST00000439717 MRGPRX2Q96LB1 330 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 TMEM121Q9BTD3 319 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 SLC32A1Q9H598 525 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 HOMER3Q9NSC5 361 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 PYCARDQ9ULZ3 195 aa11.82□□□□□ -0.52
HSPG2-206ENST00000439717 C1orf232A0A0U1RR37 186 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 GOLGA6CA6NDK9 693 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 GOLGA6BA6NDN3 693 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 ENC1O14682 589 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 FLRT2O43155 660 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 CLDN7O95471 211 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 CSF2P04141 144 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 PCCBP05166 539 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 PYGLP06737 847 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 ITGAVP06756 1048 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 ATXN1LP0C7T5 689 aaKnown RBP11.81□□□□□ -0.52
HSPG2-206ENST00000439717 GOLGA6DP0CG33 693 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 TSHRP16473 764 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 HLA-DPA1P20036 260 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 PSMB4P28070 264 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 HTR1BP28222 390 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 TEAD1P28347 426 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 EPHA8P29322 1005 aaPredicted RBP11.81□□□□□ -0.52
HSPG2-206ENST00000439717 CXCR5P32302 372 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 TRIM23P36406 574 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 ETV3P41162 512 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 FZD2Q14332 565 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 SIX1Q15475 284 aaPredicted RBP11.81□□□□□ -0.52
HSPG2-206ENST00000439717 SLC1A5Q15758 541 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 LONRF2Q1L5Z9 754 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 PARP6Q2NL67 630 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 INAVAQ3KP66 663 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 PNCKQ6P2M8 343 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 ARHGEF18Q6ZSZ5 1173 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 Q6ZVL8 140 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 KDELC2Q7Z4H8 507 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 PARGQ86W56 976 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 NAXDQ8IW45 347 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 KLHDC8BQ8IXV7 354 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 RASGEF1CQ8N431 466 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 IPMKQ8NFU5 416 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 SAP25Q8TEE9 199 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 C1orf54Q8WWF1 131 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 ATG4AQ8WYN0 398 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 LRRC45Q96CN5 670 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 SMIM14Q96QK8 99 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 NAP1L3Q99457 506 aaPredicted RBP11.81□□□□□ -0.52
HSPG2-206ENST00000439717 APOOQ9BUR5 198 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 FSD1LQ9BXM9 530 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 TRABDQ9H4I3 376 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 ZFYVE1Q9HBF4 777 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 KCND1Q9NSA2 647 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 GOLGA6AQ9NYA3 693 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 PKD2L2Q9NZM6 624 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 HACD3Q9P035 362 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 TTC7AQ9ULT0 858 aaPredicted RBP11.81□□□□□ -0.52
HSPG2-206ENST00000439717 ZNF148Q9UQR1 794 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 DRG1Q9Y295 367 aaKnown RBP11.81□□□□□ -0.52
HSPG2-206ENST00000439717 DOCK9Q9BZ29 2069 aa11.81□□□□□ -0.52
HSPG2-206ENST00000439717 DCDC2BA2VCK2 349 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 USP27XA6NNY8 438 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 F5H423 210 aaPredicted RBP11.8□□□□□ -0.52
HSPG2-206ENST00000439717 H3BM21 787 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 CACNB4O00305 520 aaPredicted RBP11.8□□□□□ -0.52
HSPG2-206ENST00000439717 PDE2AO00408 941 aaPredicted RBP11.8□□□□□ -0.52
HSPG2-206ENST00000439717 CES2O00748 559 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 PSMD3O43242 534 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 ATP1A1P05023 1023 aaKnown RBP11.8□□□□□ -0.52
HSPG2-206ENST00000439717 FGF1P05230 155 aa11.8□□□□□ -0.52
HSPG2-206ENST00000439717 C1SP09871 688 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms