RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 ODF2Q5BJF6 829 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 C3orf38Q5JPI3 329 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 BROXQ5VW32 411 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 NCBP2-AS2Q69YL0 99 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 ARL14Q8N4G2 192 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 KYQ8NBH2 561 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 KIAA1524Q8TCG1 905 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 OR1E3Q8WZA6 343 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 CCDC42Q96M95 316 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 DNAJC7Q99615 494 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 CYP4F12Q9HCS2 524 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 FGF22Q9HCT0 170 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 TTLL3Q9Y4R7 772 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 APC2O95996 2303 aa18.82■□□□□ 0.6
CCDC78-204ENST00000439619 ZW10O43264 779 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 ITPKBP27987 946 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 ARSEP51690 589 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 CCDC173Q0VFZ6 552 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 CCNYQ8ND76 341 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 WDR36Q8NI36 951 aaKnown RBP18.81■□□□□ 0.6
CCDC78-204ENST00000439619 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.81■□□□□ 0.6
CCDC78-204ENST00000439619 FATE1Q969F0 183 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 CCDC74AQ96AQ1 378 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 CCDC97Q96F63 343 aaPredicted RBP18.81■□□□□ 0.6
CCDC78-204ENST00000439619 DTD2Q96FN9 168 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 ATXN7L3BQ96GX2 97 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 TSGA13Q96PP4 275 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 GFM1Q96RP9 751 aaKnown RBP18.81■□□□□ 0.6
CCDC78-204ENST00000439619 MCCC1Q96RQ3 725 aaPredicted RBP18.81■□□□□ 0.6
CCDC78-204ENST00000439619 STRADBQ9C0K7 418 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 TSPY26PQ9H489 355 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 DPEP2Q9H4A9 486 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 RBM22Q9NW64 420 aaKnown RBP eCLIP18.81■□□□□ 0.6
CCDC78-204ENST00000439619 NENFQ9UMX5 172 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 SATB2Q9UPW6 733 aa18.81■□□□□ 0.6
CCDC78-204ENST00000439619 ARID1BQ8NFD5 2236 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-204ENST00000439619 PRSS38A1L453 326 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 NPIPB15A6NHN6 443 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-204ENST00000439619 PYGLP06737 847 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 CCNB1P14635 433 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 GLB1P16278 677 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 ZNF30P17039 623 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 ETV3P41162 512 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 MLLT3P42568 568 aaPredicted RBP18.8■□□□□ 0.6
CCDC78-204ENST00000439619 UCNP55089 124 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 ILF3Q12906 894 aaKnown RBP eCLIP18.8■□□□□ 0.6
CCDC78-204ENST00000439619 ATP13A4Q4VNC1 1196 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 RAET1GQ6H3X3 334 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 FOXR1Q6PIV2 292 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 IGF2-ASQ6U949 168 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 HEATR4Q86WZ0 1026 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 MAML1Q92585 1016 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 NSMCE3Q96MG7 304 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 MAK16Q9BXY0 300 aaKnown RBP18.8■□□□□ 0.6
CCDC78-204ENST00000439619 TEX101Q9BY14 249 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 GSDMCQ9BYG8 508 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 CARS2Q9HA77 564 aaKnown RBP18.8■□□□□ 0.6
CCDC78-204ENST00000439619 MRPL40Q9NQ50 206 aaKnown RBP18.8■□□□□ 0.6
CCDC78-204ENST00000439619 PPIL1Q9Y3C6 166 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 PCDHGA8Q9Y5G5 932 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 ENTPD2Q9Y5L3 495 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 ACACAQ13085 2346 aa18.8■□□□□ 0.6
CCDC78-204ENST00000439619 CCDC187A0A096LP49 1063 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 CTPS1P17812 591 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 GM2AP17900 193 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 TEAD1P28347 426 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 ARHGAP25P42331 645 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 GPR1P46091 355 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 RPL26P61254 145 aaKnown RBP18.79■□□□□ 0.6
CCDC78-204ENST00000439619 EIF3IQ13347 325 aaKnown RBP18.79■□□□□ 0.6
CCDC78-204ENST00000439619 BIRC2Q13490 618 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 MESDQ14696 234 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 Q6ZVL8 140 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 HSD11B1LQ7Z5J1 315 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 RHOT2Q8IXI1 618 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP18.79■□□□□ 0.6
CCDC78-204ENST00000439619 GPR156Q8NFN8 814 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 KCNE4Q8WWG9 221 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 TMEM74Q96NL1 305 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 LGR4Q9BXB1 951 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 PACSIN1Q9BY11 444 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 TMEM168Q9H0V1 697 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 ABHD10Q9NUJ1 306 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 RPL26L1Q9UNX3 145 aaKnown RBP18.79■□□□□ 0.6
CCDC78-204ENST00000439619 ZFYVE26Q68DK2 2539 aa18.79■□□□□ 0.6
CCDC78-204ENST00000439619 ADAMTS20P59510 1910 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 LRRD1A4D1F6 860 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 B4DGG1 531 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 NTN3O00634 580 aaPredicted RBP18.78■□□□□ 0.6
CCDC78-204ENST00000439619 RPLP0P05388 317 aaKnown RBP18.78■□□□□ 0.6
CCDC78-204ENST00000439619 PNLIPP16233 465 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 LHCGRP22888 699 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 TAS2R40P59535 323 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 CDK3Q00526 305 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 DPTQ07507 201 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 C14orf28Q4W4Y0 310 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 LRRC66Q68CR7 880 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 ALG1LQ6GMV1 187 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 OGFOD3Q6PK18 319 aa18.78■□□□□ 0.6
CCDC78-204ENST00000439619 CNGA4Q8IV77 575 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms