RNA–Protein interactions for RNA: ENST00000438796.6

LRCH3-206, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS P5 TSL 2 BASIC

Gene LRCH3, Length 7,394 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-206ENST00000438796 SHBGP04278 402 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 EIF4BP23588 611 aaKnown RBP13.79□□□□□ -0.2
LRCH3-206ENST00000438796 CORO1AP31146 461 aaKnown RBP13.79□□□□□ -0.2
LRCH3-206ENST00000438796 RABGGTBP53611 331 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.79□□□□□ -0.2
LRCH3-206ENST00000438796 TAPT1Q6NXT6 567 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 ETNPPLQ8TBG4 499 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 CAPSLQ8WWF8 208 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 APBB2Q92870 758 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 ZNF607Q96SK3 696 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 NECTIN3Q9NQS3 549 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 PHF24Q9UPV7 400 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 XKRYO14609 159 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 GRM6O15303 877 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 STAT5AP42229 794 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 PPP3CAQ08209 521 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 SPIRE1Q08AE8 756 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 PERM1Q5SV97 790 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 MECRQ9BV79 373 aa13.79□□□□□ -0.2
LRCH3-206ENST00000438796 MTF2Q9Y483 593 aaPredicted RBP13.79□□□□□ -0.2
LRCH3-206ENST00000438796 RPTORQ8N122 1335 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 UBE2QL1A1L167 161 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 AXIN1O15169 862 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CDH3P22223 829 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ATXN1P54253 815 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 SQLEQ14534 574 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 PAPD7Q5XG87 772 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 SLC30A6Q6NXT4 461 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 KYAT3Q6YP21 454 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CHSY3Q70JA7 882 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 SMG7Q92540 1137 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 PWWP2AQ96N64 755 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 GIT1Q9Y2X7 761 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 PAGE1O75459 146 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ARF4P18085 180 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CBX5P45973 191 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 PSMD7P51665 324 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CYP4F8P98187 520 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CCNYL2Q5T2Q4 361 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 RFWD3Q6PCD5 774 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ATG14Q6ZNE5 492 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 PACS2Q86VP3 889 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ZNF433Q8N7K0 673 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ITCHQ96J02 903 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 VAT1Q99536 393 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 DUS2Q9NX74 493 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 EVLQ9UI08 416 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ZNF490Q9ULM2 529 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ERGIC3Q9Y282 383 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 MAP4K5Q9Y4K4 846 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 FRMPD4Q14CM0 1322 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CPSF4LA6NMK7 179 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 SLC31A1O15431 190 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ITGA7Q13683 1181 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 DACT2Q5SW24 774 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 APOBEC3HQ6NTF7 200 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CXXC5Q7LFL8 322 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ZCCHC9Q8N567 271 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 OR5T3Q8NGG3 340 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 FAM81AQ8TBF8 368 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 GAL3ST1Q99999 423 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 SLC39A8Q9C0K1 460 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 FBXW2Q9UKT8 454 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 LRCH1Q9Y2L9 728 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CCNDBP1O95273 360 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 UGT2B4P06133 528 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 TMEM119Q4V9L6 283 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CHERPQ8IWX8 916 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 PIH1D2Q8WWB5 315 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 RNF31Q96EP0 1072 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 FAM105AQ9NUU6 356 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 PPIDQ08752 370 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 MSLNQ13421 630 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 C10orf107Q8IVU9 208 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 DEFB119Q8N690 84 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 PTCD2Q8WV60 388 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CD101Q93033 1021 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 EXOSC8Q96B26 276 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CHADO15335 359 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CFIP05156 583 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 MSX2P35548 267 aaPredicted RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 CDK7P50613 346 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 GALK1P51570 392 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 ZNF846Q147U1 533 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 SMCO1Q147U7 214 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 LSM12Q3MHD2 195 aaKnown RBP13.78□□□□□ -0.2
LRCH3-206ENST00000438796 C12orf56Q8IXR9 622 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 TTPALQ9BTX7 342 aa13.78□□□□□ -0.2
LRCH3-206ENST00000438796 TNS2Q63HR2 1409 aa13.77□□□□□ -0.2
LRCH3-206ENST00000438796 RGS20O76081 388 aa13.77□□□□□ -0.2
LRCH3-206ENST00000438796 CRYBB1P53674 252 aaPredicted RBP13.77□□□□□ -0.2
LRCH3-206ENST00000438796 NEK5Q6P3R8 708 aa13.77□□□□□ -0.2
LRCH3-206ENST00000438796 KCNK18Q7Z418 384 aa13.77□□□□□ -0.2
LRCH3-206ENST00000438796 MAP4K3Q8IVH8 894 aa13.77□□□□□ -0.2
LRCH3-206ENST00000438796 LENG1Q96BZ8 264 aaPredicted RBP13.77□□□□□ -0.2
LRCH3-206ENST00000438796 VCPIP1Q96JH7 1222 aa13.77□□□□□ -0.2
LRCH3-206ENST00000438796 ART5Q96L15 291 aa13.77□□□□□ -0.2
LRCH3-206ENST00000438796 PPP3R2Q96LZ3 170 aa13.77□□□□□ -0.2
LRCH3-206ENST00000438796 Q96MT0 163 aa13.77□□□□□ -0.2
LRCH3-206ENST00000438796 TCF25Q9BQ70 676 aa13.77□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms