RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 M0QZQ0 153 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 LIN7AO14910 233 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 INSIG1O15503 277 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 RNASEH1O60930 286 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 NR6A1Q15406 480 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 TEDDM1Q5T9Z0 273 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 ARHGAP36Q6ZRI8 547 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 METTL3Q86U44 580 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 RELL1Q8IUW5 271 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 TTC9BQ8N6N2 239 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 NXNL1Q96CM4 212 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 MFSD1Q9H3U5 465 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 PNPOQ9NVS9 261 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 HDAC3O15379 428 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 RPP40O75818 363 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 CDH13P55290 713 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 DAB2P98082 770 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 MSLNQ13421 630 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 ACOX1Q15067 660 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 FAM151BQ6UXP7 276 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 RPL10LQ96L21 214 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 PANX3Q96QZ0 392 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 TLE6Q9H808 572 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 CERS4Q9HA82 394 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 FBXL21Q9UKT6 434 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 WASF2Q9Y6W5 498 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 TYROBPO43914 113 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 E2F6O75461 281 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 PCDH8O95206 1070 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 F7P08709 466 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 ACADSP16219 412 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 PLOD1Q02809 727 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 WASHC5Q12768 1159 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 CTC1Q2NKJ3 1217 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 ALFQ53S48 1182 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 TRNP1Q6NT89 227 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 FBXL19Q6PCT2 694 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 METTL6Q8TCB7 284 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 STYXQ8WUJ0 223 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 SMG7Q92540 1137 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 MYO19Q96H55 970 aa11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 SEMA4BQ9NPR2 832 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 FCF1Q9Y324 198 aaKnown RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 ARIH1Q9Y4X5 557 aaPredicted RBP11.59□□□□□ -0.55
TRAPPC9-202ENST00000438773 A0A1B0GVG6 124 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 DCLK1O15075 740 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 SYNCRIPO60506 623 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 TBX10O75333 385 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 PROCP04070 461 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 SERPIND1P05546 499 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 OR56A5P0C7T3 313 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 PKNOX1P55347 436 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 TAS2R39P59534 338 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 HECTD2Q5U5R9 776 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 KIAA0408Q6ZU52 694 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 SNX32Q86XE0 403 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 RAB42Q8N4Z0 105 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 CENPIQ92674 756 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 CYP2S1Q96SQ9 504 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 TNKS2Q9H2K2 1166 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 CCDC167Q9P0B6 97 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 MCM3APO60318 1980 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 QSER1Q2KHR3 1735 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 ARHGAP10A1A4S6 786 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 NR5A2O00482 541 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 SOD2P04179 222 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 UGT2B4P06133 528 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 CYP2A6P11509 494 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 IL10P22301 178 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 SH3BGRP55822 239 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 PFKPQ01813 784 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 PKDCCQ504Y2 493 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 BNC2Q6ZN30 1099 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 RINLQ6ZS11 566 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 ALYREFQ86V81 257 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 ENDOVQ8N8Q3 282 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 KLHDC9Q8NEP7 349 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 ING5Q8WYH8 240 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 SUSD6Q92537 303 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 TMEM159Q96B96 161 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 MCOLN1Q9GZU1 580 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 RAP2CQ9Y3L5 183 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 INSL6Q9Y581 213 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZNFX1Q9P2E3 1918 aaKnown RBP11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 FAM159BA6NKW6 160 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 TK2O00142 265 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 EPHA3P29320 983 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 SLC34A1Q06495 639 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 PRKD1Q15139 912 aaPredicted RBP11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 KYQ8NBH2 561 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 MPP4Q96JB8 637 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 HGH1Q9BTY7 390 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZFYVE1Q9HBF4 777 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 ZNF358Q9NW07 568 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 SNX13Q9Y5W8 968 aa11.58□□□□□ -0.56
TRAPPC9-202ENST00000438773 SCAPQ12770 1279 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 ATXN7L2Q5T6C5 722 aaPredicted RBP11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 MSANTD2Q6P1R3 559 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 FAM171BQ6P995 826 aa11.57□□□□□ -0.56
TRAPPC9-202ENST00000438773 SERPINA13PQ6UXR4 307 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms