RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 CIDEBQ9UHD4 219 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 VWA7Q9Y334 891 aa10.44□□□□□ -0.74
CLSTN1-203ENST00000435891 A0A1B0GTW7 788 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 MUSKO15146 869 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 S1PR4O95977 384 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 HSPA1AP0DMV8 641 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 HSPA1BP0DMV9 641 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 ADSLP30566 484 aaPredicted RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 POLD2P49005 469 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 PSME3P61289 254 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 C16orf72Q14CZ0 275 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 PITRM1Q5JRX3 1037 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 MARC1Q5VT66 337 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 ISCA2Q86U28 154 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 ARRDC2Q8TBH0 407 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 FAM110BQ8TC76 370 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 TRIB2Q92519 343 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 BTBD9Q96Q07 612 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 PRKD2Q9BZL6 878 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 SEMA6AQ9H2E6 1030 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 CACNA2D2Q9NY47 1150 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 DSEQ9UL01 958 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 PRORSD1PA6NEY8 169 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 TRPC5OSA6NMA1 111 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 C9JVG2 144 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 LDB2O43679 373 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 CSPG5O95196 566 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 ASGR1P07306 291 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 DNAJB1P25685 340 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 YBX1P67809 324 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 TIAL1Q01085 375 aaKnown RBP eCLIP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 PDAP1Q13442 181 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 LRP8Q14114 963 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 SEMA3AQ14563 771 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 FBXO48Q5FWF7 155 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 AGAP9Q5VTM2 703 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 RAP1GAP2Q684P5 730 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 ZNF549Q6P9A3 640 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 UMODL1-AS1Q8N2C9 162 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 TMEM102Q8N9M5 508 aaPredicted RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 SMYD1Q8NB12 490 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 ATAD1Q8NBU5 361 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 CNBD2Q96M20 576 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 SERPINB11Q96P15 392 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 MEAF6Q9HAF1 191 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 PRG3Q9Y2Y8 225 aaPredicted RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 ARL5AQ9Y689 179 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 AP4B1Q9Y6B7 739 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 TMEM221A6NGB7 291 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 SUPT7LO94864 414 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 SIX3O95343 332 aaPredicted RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 WISP3O95389 354 aaPredicted RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 CLPTM1O96005 669 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 ATXN1LP0C7T5 689 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 CYBAP13498 195 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 ACVRL1P37023 503 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 FASTKQ14296 549 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 MAPRE1Q15691 268 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 REP15Q6BDI9 236 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 FBXL22Q6P050 247 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 IYDQ6PHW0 289 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 KIAA0408Q6ZU52 694 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 RYBPQ8N488 228 aaPredicted RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 DGCR14Q96DF8 476 aaKnown RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 LRCH3Q96II8 777 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 POLR3BQ9NW08 1133 aaPredicted RBP10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 APPL1Q9UKG1 709 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 GABRQQ9UN88 632 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 NOD1Q9Y239 953 aa10.43□□□□□ -0.74
CLSTN1-203ENST00000435891 MROH6A6NGR9 719 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 PSMD12O00232 456 aaPredicted RBP10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 UBDO15205 165 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 RENBPP51606 427 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 CLCN5P51795 746 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 NME5P56597 212 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 TBX4P57082 545 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 RFTN1Q14699 578 aaPredicted RBP10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 MAP3K21Q5TCX8 1036 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 CYP2R1Q6VVX0 501 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 PATL1Q86TB9 770 aaKnown RBP10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 ZNF598Q86UK7 904 aaKnown RBP10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 RTN4RL1Q86UN2 441 aaPredicted RBP10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 TRIM62Q9BVG3 475 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 VPS45Q9NRW7 570 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 TLR6Q9Y2C9 796 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 TRAF6Q9Y4K3 522 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 A0A1B0GTL3 188 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 ALDOCP09972 364 aaKnown RBP10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 NAT1P18440 290 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 FGFR3P22607 806 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 FOXA1P55317 472 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 SLC14A2Q15849 920 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 NRF1Q16656 503 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 RARS2Q5T160 578 aaKnown RBP10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 MARVELD2Q8N4S9 558 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 TMCO5AQ8N6Q1 288 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 OR13C4Q8NGS5 318 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 SMIM14Q96QK8 99 aa10.42□□□□□ -0.74
CLSTN1-203ENST00000435891 MRPL1Q9BYD6 325 aaKnown RBP10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms