RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 UBFD1O14562 309 aaKnown RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 UBDO15205 165 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 PIM1P11309 404 aaPredicted RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 ALDH1A3P47895 512 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 PSMD8P48556 350 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 HERVK_113P63132 956 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 GALNT3Q14435 633 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 RSPO2Q6UXX9 243 aaPredicted RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 RNF19BQ6ZMZ0 732 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 TMA16Q96EY4 203 aaKnown RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 TUBGCP5Q96RT8 1024 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 ERVK-6Q9BXR3 956 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 TRPC7Q9HCX4 862 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 PAK6Q9NQU5 681 aaPredicted RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 POLR3BQ9NW08 1133 aaPredicted RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 MTF2Q9Y483 593 aaPredicted RBP18.61■□□□□ 0.57
CLK1-205ENST00000434813 TRAF6Q9Y4K3 522 aa18.61■□□□□ 0.57
CLK1-205ENST00000434813 ANKRD36A6QL64 1941 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 CCDC162PA2VCL2 907 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 TBC1D4O60343 1298 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 SERPINF2P08697 491 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 HOXD9P28356 352 aaPredicted RBP18.6■□□□□ 0.57
CLK1-205ENST00000434813 KCNC1P48547 511 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 MRPS22P82650 360 aaKnown RBP18.6■□□□□ 0.57
CLK1-205ENST00000434813 MS4A2Q01362 244 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 STX5Q13190 355 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 MED21Q13503 144 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 FASTKQ14296 549 aaKnown RBP18.6■□□□□ 0.57
CLK1-205ENST00000434813 SEMA3AQ14563 771 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 TYSND1Q2T9J0 566 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 GRAMD1BQ3KR37 738 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 BHLHE22Q8NFJ8 381 aaPredicted RBP18.6■□□□□ 0.57
CLK1-205ENST00000434813 SH3RF2Q8TEC5 729 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 C2orf15Q8WU43 125 aaKnown RBP18.6■□□□□ 0.57
CLK1-205ENST00000434813 TRAPPC9Q96Q05 1148 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 TRIB3Q96RU7 358 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 MGME1Q9BQP7 344 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 RNF208Q9H0X6 261 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 DTNAQ9Y4J8 743 aa18.6■□□□□ 0.57
CLK1-205ENST00000434813 STX16-NPEPL1H3BU86 382 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 PSMD12O00232 456 aaPredicted RBP18.59■□□□□ 0.57
CLK1-205ENST00000434813 TRIM38O00635 465 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 ACOT8O14734 319 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 SMIM24O75264 130 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 ZNF37AP17032 561 aaPredicted RBP18.59■□□□□ 0.57
CLK1-205ENST00000434813 TIAL1Q01085 375 aaKnown RBP eCLIP18.59■□□□□ 0.57
CLK1-205ENST00000434813 ADGRE1Q14246 886 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 PPP1R3AQ16821 1122 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 UNC50Q53HI1 259 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 FUT10Q6P4F1 479 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 LGI2Q8N0V4 545 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 PHC3Q8NDX5 983 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 OR13C4Q8NGS5 318 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 CASD1Q96PB1 797 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 MAGEH1Q9H213 219 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 RETREG1Q9H6L5 497 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 CATSPERZQ9NTU4 200 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 CACNA2D2Q9NY47 1150 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 RIMS3Q9UJD0 308 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 SARDHQ9UL12 918 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 PCDHGA7Q9Y5G6 932 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 PITPNM1O00562 1244 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 MAP3K13O43283 966 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 PQBP1O60828 265 aaKnown RBP18.59■□□□□ 0.57
CLK1-205ENST00000434813 SUPT7LO94864 414 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 NDST3O95803 873 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 SLC4A1P02730 911 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 ARSAP15289 507 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 VCLP18206 1134 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 SLC11A1P49279 550 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 ATP4BP51164 291 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 KCNQ1P51787 676 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 STC1P52823 247 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 PSME3P61289 254 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 RNF220Q5VTB9 566 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 CYHR1Q6ZMK1 362 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 BBS5Q8N3I7 341 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 ICA1LQ8NDH6 482 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 OR52K2Q8NGK3 314 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 OR4L1Q8NH43 312 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 ASB9Q96DX5 294 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 ASB2Q96Q27 587 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 CDK5RAP1Q96SZ6 601 aaKnown RBP18.59■□□□□ 0.57
CLK1-205ENST00000434813 TTLL2Q9BWV7 592 aa18.59■□□□□ 0.57
CLK1-205ENST00000434813 MRPL40Q9NQ50 206 aaKnown RBP18.59■□□□□ 0.57
CLK1-205ENST00000434813 SUCOQ9UBS9 1254 aaKnown RBP18.59■□□□□ 0.57
CLK1-205ENST00000434813 NBNO60934 754 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 ZCCHC18P0CG32 403 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 LRP8Q14114 963 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 PTPRCAPQ14761 206 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 RTP2Q5QGT7 225 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 RARS2Q5T160 578 aaKnown RBP18.58■□□□□ 0.56
CLK1-205ENST00000434813 REP15Q6BDI9 236 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 RNF148Q8N7C7 305 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 DBF4BQ8NFT6 615 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 RHEBL1Q8TAI7 183 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 C19orf60Q96EN9 201 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 AARSD1Q9BTE6 412 aaKnown RBP18.58■□□□□ 0.56
CLK1-205ENST00000434813 FAM192AQ9GZU8 254 aa18.58■□□□□ 0.56
CLK1-205ENST00000434813 INTS10Q9NVR2 710 aaKnown RBP18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms