RNA–Protein interactions for RNA: ENST00000434435.1

SMARCAL1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 4

Gene SMARCAL1, Length 544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-208ENST00000434435 RIMKLBQ9ULI2 386 aa23.23■■□□□ 1.31
SMARCAL1-208ENST00000434435 ZDBF2Q9HCK1 2354 aa23.23■■□□□ 1.31
SMARCAL1-208ENST00000434435 UQCRHLA0A096LP55 91 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 A0A0U1RQS6 177 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 CCDC78A2IDD5 438 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 MROH6A6NGR9 719 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 PSMD11O00231 422 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 SLC34A2O95436 690 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 UQCRHP07919 91 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 HMGCLP35914 325 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 ZNF140P52738 457 aaPredicted RBP23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 STC1P52823 247 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 BRD3Q15059 726 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 LIPIQ6XZB0 460 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 TMC3Q7Z5M5 1100 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 AENQ8WTP8 325 aaKnown RBP23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 PEX13Q92968 403 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 ZNF669Q96BR6 464 aaPredicted RBP23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 CFAP36Q96G28 342 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 C9orf72Q96LT7 481 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 WRAP53Q9BUR4 548 aaKnown RBP23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 BTBD1Q9H0C5 482 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 KDM4CQ9H3R0 1056 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 EPHX3Q9H6B9 360 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 SGK2Q9HBY8 427 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 PREBQ9HCU5 417 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 CHRAC1Q9NRG0 131 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 CYP8B1Q9UNU6 501 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 PKP3Q9Y446 797 aa23.22■■□□□ 1.31
SMARCAL1-208ENST00000434435 CCDC151A5D8V7 595 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 STX7O15400 261 aaKnown RBP23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 ERLIN1O75477 346 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 USP1O94782 785 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 PCDH8O95206 1070 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 TTC4O95801 387 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 C1SP09871 688 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 OXTRP30559 389 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 LIG3P49916 1009 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 IGDCC3Q8IVU1 814 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 DTWD2Q8NBA8 298 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 TTC25Q96NG3 672 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 CDC42EP4Q9H3Q1 356 aaKnown RBP23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 PKD2L2Q9NZM6 624 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 IL17CQ9P0M4 197 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 RPS6KL1Q9Y6S9 549 aa23.21■■□□□ 1.31
SMARCAL1-208ENST00000434435 AXIN1O15169 862 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 BUD23O43709 281 aaKnown RBP23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 POLBP06746 335 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 NMBRP28336 390 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 HOXA6P31267 233 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 PXNP49023 591 aaPredicted RBP23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 SKIDA1Q1XH10 827 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 SPANXN3Q5MJ09 141 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 TMEM135Q86UB9 458 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 C1orf210Q8IVY1 113 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 PALM2Q8IXS6 379 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 OR4K2Q8NGD2 314 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 CAVIN3Q969G5 261 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 DNAJC1Q96KC8 554 aaKnown RBP23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 C19orf43Q9BQ61 176 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 NLE1Q9NVX2 485 aaPredicted RBP23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 KCTD3Q9Y597 815 aa23.2■■□□□ 1.3
SMARCAL1-208ENST00000434435 LRRC72A6NJI9 287 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 C6P13671 934 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 PAMP19021 973 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 HADHAP40939 763 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 PTSQ03393 145 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 CRYMQ14894 314 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 ANKRD20A4Q4UJ75 823 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 STEAP4Q687X5 459 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 KIAA1161Q6NSJ0 714 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 ESRP1Q6NXG1 681 aaKnown RBP23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 NEK5Q6P3R8 708 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 CES3Q6UWW8 571 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 HSD11B1LQ7Z5J1 315 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 RAVER1Q8IY67 606 aaKnown RBP23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 OR13C4Q8NGS5 318 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 OR2T34Q8NGX1 318 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 EID2BQ96D98 161 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 MFSD3Q96ES6 412 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 ZNF778Q96MU6 729 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 TRIM56Q9BRZ2 755 aaKnown RBP23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 COL25A1Q9BXS0 654 aaPredicted RBP23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 TXLNGYQ9BZA5 131 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 RAD18Q9NS91 495 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 TREX1Q9NSU2 369 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 NINJ2Q9NZG7 142 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 DYNC1LI1Q9Y6G9 523 aaKnown RBP23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 PLXNB3Q9ULL4 1909 aa23.19■■□□□ 1.3
SMARCAL1-208ENST00000434435 TBC1D3DA0A087WVF3 549 aa23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 TBC1D3IA0A087WXS9 549 aa23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 TBC1D3EA0A087X179 549 aa23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 TBC1D3KA0A087X1G2 549 aa23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 TBC1D3FA6NER0 549 aaPredicted RBP23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 PRR23AA6NEV1 266 aa23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 FAM47DPA6NHR8 397 aa23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 TBC1D3LB9A6J9 549 aa23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 LZTS3O60299 673 aaPredicted RBP23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 MMP20O60882 483 aa23.18■■□□□ 1.3
SMARCAL1-208ENST00000434435 RNGTTO60942 597 aaKnown RBP23.18■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms