RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 JRKLQ9Y4A0 524 aa18.39■□□□□ 0.53
HLA-F-220ENST00000434407 KCNN4O15554 427 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 NDST3O95803 873 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 ARRB1P49407 418 aaPredicted RBP18.38■□□□□ 0.53
HLA-F-220ENST00000434407 STC1P52823 247 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 WNT3AP56704 352 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 ARHGEF7Q14155 803 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 ACOX1Q15067 660 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 SIX1Q15475 284 aaPredicted RBP18.38■□□□□ 0.53
HLA-F-220ENST00000434407 OASLQ15646 514 aaKnown RBP18.38■□□□□ 0.53
HLA-F-220ENST00000434407 LRRC66Q68CR7 880 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 ESRP1Q6NXG1 681 aaKnown RBP18.38■□□□□ 0.53
HLA-F-220ENST00000434407 KANSL1Q7Z3B3 1105 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 SAP25Q8TEE9 199 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 RTP4Q96DX8 246 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 MRGPRX2Q96LB1 330 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 SPATA13Q96N96 652 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 UBP1Q9NZI7 540 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 NCOR2Q9Y618 2525 aa18.38■□□□□ 0.53
HLA-F-220ENST00000434407 SCN8AQ9UQD0 1980 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 A0A0U1RQS6 177 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 CBFA2T3O75081 653 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 PMPCBO75439 489 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 STK10O94804 968 aaKnown RBP18.37■□□□□ 0.53
HLA-F-220ENST00000434407 HOXC4P09017 264 aaPredicted RBP18.37■□□□□ 0.53
HLA-F-220ENST00000434407 CEACAM1P13688 526 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 EPHA8P29322 1005 aaPredicted RBP18.37■□□□□ 0.53
HLA-F-220ENST00000434407 ETV3P41162 512 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 DPTQ07507 201 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 CCDC173Q0VFZ6 552 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 MPP3Q13368 585 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 PDE1CQ14123 709 aaPredicted RBP18.37■□□□□ 0.53
HLA-F-220ENST00000434407 INPP5AQ14642 412 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 SUZ12Q15022 739 aaKnown RBP18.37■□□□□ 0.53
HLA-F-220ENST00000434407 ITPRIPL1Q6GPH6 555 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 Q6ZVL8 140 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 NLRP8Q86W28 1048 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 PELI3Q8N2H9 469 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 PLA2G15Q8NCC3 412 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 NUS1Q96E22 293 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 APOOQ9BUR5 198 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 MAGEE1Q9HCI5 957 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 RSPH14Q9UHP6 348 aa18.37■□□□□ 0.53
HLA-F-220ENST00000434407 COL5A1P20908 1838 aaPredicted RBP18.37■□□□□ 0.53
HLA-F-220ENST00000434407 FLRT2O43155 660 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 LIASO43766 372 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 SH3BP5O60239 455 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 GCATO75600 419 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 KCNK5O95279 499 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 CLDN7O95471 211 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 C1SP09871 688 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 ATXN1LP0C7T5 689 aaKnown RBP18.36■□□□□ 0.53
HLA-F-220ENST00000434407 TEAD1P28347 426 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 DEKP35659 375 aaKnown RBP18.36■□□□□ 0.53
HLA-F-220ENST00000434407 BNIP3Q12983 259 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 EIF2B5Q13144 721 aaKnown RBP18.36■□□□□ 0.53
HLA-F-220ENST00000434407 PTK2BQ14289 1009 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 GALNT3Q14435 633 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 PCSK7Q16549 785 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 PNCKQ6P2M8 343 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 MACC1Q6ZN28 852 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 ZNF765Q7L2R6 523 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 DGLUCYQ7Z3D6 616 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 PARGQ86W56 976 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 NAXDQ8IW45 347 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 NRSN1Q8IZ57 195 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 BAHD1Q8TBE0 780 aaPredicted RBP18.36■□□□□ 0.53
HLA-F-220ENST00000434407 CCDC110Q8TBZ0 833 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 ATG4AQ8WYN0 398 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 TRMT1Q9NXH9 659 aaKnown RBP18.36■□□□□ 0.53
HLA-F-220ENST00000434407 SPEGQ15772 3267 aa18.36■□□□□ 0.53
HLA-F-220ENST00000434407 KNTC1P50748 2209 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 ARHGEF17Q96PE2 2063 aaPredicted RBP18.35■□□□□ 0.53
HLA-F-220ENST00000434407 ANXA9O76027 345 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 CSF2P04141 144 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 PCCBP05166 539 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 NME1P15531 152 aaKnown RBP18.35■□□□□ 0.53
HLA-F-220ENST00000434407 PSMB4P28070 264 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 STIP1P31948 543 aaKnown RBP18.35■□□□□ 0.53
HLA-F-220ENST00000434407 GEMP55040 296 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 GDF10P55107 478 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 IL9RQ01113 521 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 ZNF569Q5MCW4 686 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 DRICH1Q6PGQ1 229 aaPredicted RBP18.35■□□□□ 0.53
HLA-F-220ENST00000434407 RFLNAQ6ZTI6 216 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 KDELC2Q7Z4H8 507 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 FAM71DQ8N9W8 422 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 DEFB124Q8NES8 71 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 EID2BQ96D98 161 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 TMEM121Q9BTD3 319 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 SLC32A1Q9H598 525 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 KLF15Q9UIH9 416 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 PCOLCE2Q9UKZ9 415 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 PNMA8BQ9ULN7 279 aaPredicted RBP18.35■□□□□ 0.53
HLA-F-220ENST00000434407 PYCARDQ9ULZ3 195 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 ZKSCAN5Q9Y2L8 839 aa18.35■□□□□ 0.53
HLA-F-220ENST00000434407 C1orf232A0A0U1RR37 186 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 RGSL1A5PLK6 1076 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 USP27XA6NNY8 438 aa18.34■□□□□ 0.53
HLA-F-220ENST00000434407 K7ESM1 405 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms