RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 HERC3Q15034 1050 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 PHKG1Q16816 387 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 SLC10A6Q3KNW5 377 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 USP41Q3LFD5 358 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 SPOUT1Q5T280 376 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 HMBOX1Q6NT76 420 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 ZYG11AQ6WRX3 759 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 C8orf59Q8N0T1 100 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 PYROXD2Q8N2H3 581 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 TMEM130Q8N3G9 435 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 ANKRD52Q8NB46 1076 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 SLC7A14Q8TBB6 771 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 BRI3BPQ8WY22 251 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 P2RY11Q96G91 374 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 MUS81Q96NY9 551 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 COQ7Q99807 217 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 CHID1Q9BWS9 393 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 REXO4Q9GZR2 422 aaKnown RBP7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 CHRAC1Q9NRG0 131 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 GDAP2Q9NXN4 497 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 TMEM9Q9P0T7 183 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 MORF4L1Q9UBU8 362 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 ANAPC2Q9UJX6 822 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 CAB39Q9Y376 341 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 MTF2Q9Y483 593 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 TIMM13Q9Y5L4 95 aaPredicted RBP7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 ORC6Q9Y5N6 252 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 RAD54BQ9Y620 910 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 SLC30A1Q9Y6M5 507 aa7.43□□□□□ -1.22
SYNPO2-203ENST00000434046 CDK5RAP2Q96SN8 1893 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 LRRC37AA6NMS7 1700 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 H0YJX3 145 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 M0QYT0 321 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 ZNF701M0R085 212 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 TBX1O43435 398 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 GCATO75600 419 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 CCNKO75909 580 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 THP07101 528 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 FCGR1AP12314 374 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 AKR1A1P14550 325 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 MYF6P23409 242 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 YWHAQP27348 245 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 DCKP27707 260 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 ADSLP30566 484 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 ECT2LQ008S8 904 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 NAB1Q13506 487 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 FRG1Q14331 258 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 POU6F1Q14863 301 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 SPRYD7Q5W111 196 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 TRAF7Q6Q0C0 670 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 PDPRQ8NCN5 879 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 SLC2A14Q8TDB8 520 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 SNX19Q92543 992 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 RORBQ92753 470 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 DEPDC7Q96QD5 511 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 TWNKQ96RR1 684 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 BDH2Q9BUT1 245 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 ELOVL4Q9GZR5 314 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 NXF3Q9H4D5 531 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 PRDM12Q9H4Q4 367 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 PLEKHA5Q9HAU0 1116 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 PLAC1Q9HBJ0 212 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 FBRSL1Q9HCM7 1045 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 EXD2Q9NVH0 621 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 DUS2Q9NX74 493 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 SUN2Q9UH99 717 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 ADAM28Q9UKQ2 775 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 LRFN2Q9ULH4 789 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 NDUFAF1Q9Y375 327 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 COL1A2P08123 1366 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 ARFGEF1Q9Y6D6 1849 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 C2CD4BA6NLJ0 364 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 TSPAN1O60635 241 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 SULT1C4O75897 302 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 STBD1O95210 358 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 AXLP30530 894 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 IDUAP35475 653 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 CDH13P55290 713 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 TPI1P60174 286 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 PHC1P78364 1004 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 IL5RAQ01344 420 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 YWHAHQ04917 246 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 SREBF2Q12772 1141 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 TRAP1Q12931 704 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 PPP1R8Q12972 351 aaKnown RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 SEMA5AQ13591 1074 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 TMEM236Q5W0B7 351 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 CXCL17Q6UXB2 119 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 S100ZQ8WXG8 99 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 C18orf25Q96B23 403 aaPredicted RBP7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 ALPK1Q96QP1 1244 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 SH3GL1Q99961 368 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 OSBPL10Q9BXB5 764 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 HAPLN2Q9GZV7 340 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 LHPPQ9H008 270 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 LHX5Q9H2C1 402 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 SATB2Q9UPW6 733 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 PRELID1Q9Y255 219 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 PCDHGA3Q9Y5H0 932 aa7.42□□□□□ -1.22
SYNPO2-203ENST00000434046 MRPL42Q9Y6G3 142 aaKnown RBP7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms