RNA–Protein interactions for RNA: ENST00000432581.2

PRKDC-203, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-203ENST00000432581 PEX6Q13608 980 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 NR1D2Q14995 579 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 CA9Q16790 459 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 TMCO4Q5TGY1 634 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 ATG14Q6ZNE5 492 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 ZNF438Q7Z4V0 828 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 PSTKQ8IV42 348 aaKnown RBP14.9□□□□□ -0.02
PRKDC-203ENST00000432581 LZTR1Q8N653 840 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 ZDHHC1Q8WTX9 485 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 NUS1Q96E22 293 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 COQ10AQ96MF6 247 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 ZNF599Q96NL3 588 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 ERGIC2Q96RQ1 377 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 KCTD15Q96SI1 283 aaPredicted RBP14.9□□□□□ -0.02
PRKDC-203ENST00000432581 TRNAU1APQ9NX07 287 aaKnown RBP14.9□□□□□ -0.02
PRKDC-203ENST00000432581 B4GALT6Q9UBX8 382 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 LIMA1Q9UHB6 759 aaKnown RBP14.9□□□□□ -0.02
PRKDC-203ENST00000432581 IL17BQ9UHF5 180 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 LRP4O75096 1905 aa14.9□□□□□ -0.02
PRKDC-203ENST00000432581 NAV2Q8IVL1 2488 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 A8MX80 341 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 STMND1H3BQB6 276 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 HTRA2O43464 458 aaPredicted RBP14.89□□□□□ -0.03
PRKDC-203ENST00000432581 B4GAT1O43505 415 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 SOCS5O75159 536 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 RNF8O76064 485 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 FGF1P05230 155 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 FAM87AP0C7U9 286 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 ITGB6P18564 788 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 ALDH4A1P30038 563 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 HSPA9P38646 679 aaKnown RBP14.89□□□□□ -0.03
PRKDC-203ENST00000432581 GPR3P46089 330 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 HCAR3P49019 387 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 ATP1A2P50993 1020 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 MAZP56270 477 aaKnown RBP14.89□□□□□ -0.03
PRKDC-203ENST00000432581 OR1D5P58170 312 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 UBXN1Q04323 297 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 BIRC2Q13490 618 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 TRA2AQ13595 282 aaKnown RBP eCLIP14.89□□□□□ -0.03
PRKDC-203ENST00000432581 LBRQ14739 615 aaKnown RBP14.89□□□□□ -0.03
PRKDC-203ENST00000432581 C16orf72Q14CZ0 275 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 TBR1Q16650 682 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 AMZ1Q400G9 498 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 NRROSQ86YC3 692 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 PELI3Q8N2H9 469 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 NPWQ8N729 165 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 SNRNP25Q9BV90 132 aaKnown RBP14.89□□□□□ -0.03
PRKDC-203ENST00000432581 TEX101Q9BY14 249 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 RDH14Q9HBH5 336 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 SPATS2LQ9NUQ6 558 aaKnown RBP14.89□□□□□ -0.03
PRKDC-203ENST00000432581 TAAR2Q9P1P5 351 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 PCSK1NQ9UHG2 260 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 UNC13CQ8NB66 2214 aa14.89□□□□□ -0.03
PRKDC-203ENST00000432581 PSMD11O00231 422 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 TERTO14746 1132 aaKnown RBP14.88□□□□□ -0.03
PRKDC-203ENST00000432581 PRPSAP2O60256 369 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 PPFIA2O75334 1257 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 HEXIM1O94992 359 aaKnown RBP14.88□□□□□ -0.03
PRKDC-203ENST00000432581 CEACAM5P06731 702 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 TEAD1P28347 426 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 VIPR1P32241 457 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 ZNF235Q14590 738 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 CNGA3Q16281 694 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 PPP6R3Q5H9R7 873 aaPredicted RBP14.88□□□□□ -0.03
PRKDC-203ENST00000432581 PLEKHA7Q6IQ23 1121 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 ARHGAP36Q6ZRI8 547 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 HEATR4Q86WZ0 1026 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 CCDC112Q8NEF3 446 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 DTD2Q96FN9 168 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 TAAR9Q96RI9 348 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 PEBP4Q96S96 227 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 DPYSL5Q9BPU6 564 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 NUDT22Q9BRQ3 303 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 FRMD8Q9BZ67 464 aaPredicted RBP14.88□□□□□ -0.03
PRKDC-203ENST00000432581 TRIM4Q9C037 500 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 PCDHGA3Q9Y5H0 932 aa14.88□□□□□ -0.03
PRKDC-203ENST00000432581 IGHV5-10-1A0A0J9YXX1 117 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 LRRC10BA6NIK2 292 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 SUV39H1O43463 412 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 ECEL1O95672 775 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 CPP00450 1065 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 CYP2A6P11509 494 aaPredicted RBP14.87□□□□□ -0.03
PRKDC-203ENST00000432581 CCL4P13236 92 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 TNFAIP3P21580 790 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 CD1CP29017 333 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 MIPP30301 263 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 GNPDA1P46926 289 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 CDK3Q00526 305 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 MYL5Q02045 173 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 BBS5Q8N3I7 341 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 ARFGAP1Q8N6T3 406 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 FNIP1Q8TF40 1166 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 PDCD6IPQ8WUM4 868 aaKnown RBP14.87□□□□□ -0.03
PRKDC-203ENST00000432581 CCDC74BQ96LY2 380 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 NSMCE3Q96MG7 304 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 NUDCD1Q96RS6 583 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 SUDS3Q9H7L9 328 aaPredicted RBP14.87□□□□□ -0.03
PRKDC-203ENST00000432581 ZWILCHQ9H900 591 aa14.87□□□□□ -0.03
PRKDC-203ENST00000432581 GEMIN8Q9NWZ8 242 aaKnown RBP14.87□□□□□ -0.03
PRKDC-203ENST00000432581 TAS2R14Q9NYV8 317 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms