RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 AGR3Q8TD06 166 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 SCG3Q8WXD2 468 aaKnown RBP19.58■□□□□ 0.72
VRK2-205ENST00000432057 NSL1Q96IY1 281 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 DRC3Q9H069 523 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 STN1Q9H668 368 aaKnown RBP19.58■□□□□ 0.72
VRK2-205ENST00000432057 ARHGAP26Q9UNA1 814 aa19.58■□□□□ 0.72
VRK2-205ENST00000432057 MGRN1O60291 552 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 SYN1P17600 705 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 LPOP22079 712 aaPredicted RBP19.57■□□□□ 0.72
VRK2-205ENST00000432057 IDH3AP50213 366 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 MPP7Q5T2T1 576 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 AGAP9Q5VTM2 703 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 RETSATQ6NUM9 610 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 SDCCAG8Q86SQ7 713 aaPredicted RBP19.57■□□□□ 0.72
VRK2-205ENST00000432057 PARP9Q8IXQ6 854 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 TTC30BQ8N4P2 665 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 HERVK_113Q902F9 699 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 UBXN10Q96LJ8 280 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 FKBPLQ9UIM3 349 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 PCDHB9Q9Y5E1 797 aa19.57■□□□□ 0.72
VRK2-205ENST00000432057 NEMP2A6NFY4 417 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 A8MUI8 341 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 TRAFD1O14545 582 aaPredicted RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 FZD6O60353 706 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 CCDC22O60826 627 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 MOSPD3O75425 235 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 ATP5BP06576 529 aaKnown RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 BMP1P13497 986 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 PFKLP17858 780 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 PSMA3P25788 255 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 PMLP29590 882 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 IRS1P35568 1242 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 RASSF2P50749 326 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 TIAL1Q01085 375 aaKnown RBP eCLIP19.56■□□□□ 0.72
VRK2-205ENST00000432057 PLEKHG6Q3KR16 790 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 CMTM8Q8IZV2 173 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 FIBINQ8TAL6 211 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 MYO19Q96H55 970 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 POMKQ9H5K3 350 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 FAM96AQ9H5X1 160 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 BPIFA1Q9NP55 256 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 KIAA1522Q9P206 1035 aaPredicted RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 EVLQ9UI08 416 aaPredicted RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 INTS6Q9UL03 887 aaKnown RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 CORO1CQ9ULV4 474 aaPredicted RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 UBA6A0AVT1 1052 aaPredicted RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 LINC01553A4QN01 128 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 CAPN14A8MX76 684 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 HNRNPCL1O60812 293 aaKnown RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 ARHGEF15O94989 841 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 PIGNO95427 931 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 SERPINA6P08185 405 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 CTPS1P17812 591 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 PTPN4P29074 926 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 EPHA5P54756 1037 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 EPHB1P54762 984 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 AP1S1P61966 158 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 PFKPQ01813 784 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 UBAP2LQ14157 1087 aaKnown RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 SLC5A9Q2M3M2 681 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 RALGPS1Q5JS13 557 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 KLC3Q6P597 504 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 MICAL1Q8TDZ2 1067 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 ACDQ96AP0 544 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 RAB3IPQ96QF0 476 aaPredicted RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 AARSD1Q9BTE6 412 aaKnown RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 TUBB6Q9BUF5 446 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 INTS10Q9NVR2 710 aaKnown RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 FNDC3AQ9Y2H6 1198 aaKnown RBP19.56■□□□□ 0.72
VRK2-205ENST00000432057 RAP2CQ9Y3L5 183 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 PDE4DIPQ5VU43 2346 aa19.56■□□□□ 0.72
VRK2-205ENST00000432057 CHD7Q9P2D1 2997 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 DIAPH2O60879 1101 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 ENO1P06733 434 aaKnown RBP19.55■□□□□ 0.72
VRK2-205ENST00000432057 EPCAMP16422 314 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 ATP5F1P24539 256 aaPredicted RBP19.55■□□□□ 0.72
VRK2-205ENST00000432057 CDKN1CP49918 316 aaPredicted RBP19.55■□□□□ 0.72
VRK2-205ENST00000432057 ARL13AQ5H913 290 aaPredicted RBP19.55■□□□□ 0.72
VRK2-205ENST00000432057 CFAP157Q5JU67 520 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 CAMK1DQ8IU85 385 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 LSMEM2Q8N112 164 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 CCNYL1Q8N7R7 359 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 LPGAT1Q92604 370 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 CCDC106Q9BWC9 280 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 TBC1D10AQ9BXI6 508 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 SHCBP1LQ9BZQ2 653 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 ILKAPQ9H0C8 392 aaPredicted RBP19.55■□□□□ 0.72
VRK2-205ENST00000432057 APOBEC2Q9Y235 224 aaKnown RBP19.55■□□□□ 0.72
VRK2-205ENST00000432057 ZNF711Q9Y462 761 aa19.55■□□□□ 0.72
VRK2-205ENST00000432057 NUP210Q8TEM1 1887 aaPredicted RBP19.55■□□□□ 0.72
VRK2-205ENST00000432057 STX7O15400 261 aaKnown RBP19.54■□□□□ 0.72
VRK2-205ENST00000432057 PRAMEF12O95522 483 aa19.54■□□□□ 0.72
VRK2-205ENST00000432057 CYBBP04839 570 aa19.54■□□□□ 0.72
VRK2-205ENST00000432057 RHOP08100 348 aa19.54■□□□□ 0.72
VRK2-205ENST00000432057 ALPIP09923 528 aa19.54■□□□□ 0.72
VRK2-205ENST00000432057 ESRRAP11474 423 aaPredicted RBP19.54■□□□□ 0.72
VRK2-205ENST00000432057 PTPN2P17706 415 aa19.54■□□□□ 0.72
VRK2-205ENST00000432057 TFEBP19484 476 aa19.54■□□□□ 0.72
VRK2-205ENST00000432057 KCNA5P22460 613 aa19.54■□□□□ 0.72
VRK2-205ENST00000432057 CALB2P22676 271 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms