RNA–Protein interactions for RNA: ENST00000431352.1

SEC13-211, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 832 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-211ENST00000431352 IL1R2P27930 398 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 ETV5P41161 510 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 ETV3P41162 512 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 MAXP61244 160 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 NSUN2Q08J23 767 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC13-211ENST00000431352 BIRC2Q13490 618 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 HLTFQ14527 1009 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC13-211ENST00000431352 PTPRRQ15256 657 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 ANO6Q4KMQ2 910 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 CCDC183Q5T5S1 534 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 DOK6Q6PKX4 331 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 SLC30A9Q6PML9 568 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 TMCO3Q6UWJ1 677 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 USP53Q70EK8 1073 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 TMPRSS9Q7Z410 1059 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 ATPAF2Q8N5M1 289 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 KIAA1524Q8TCG1 905 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 PTCD2Q8WV60 388 aaKnown RBP13.92□□□□□ -0.18
SEC13-211ENST00000431352 COQ10AQ96MF6 247 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 SEMA6CQ9H3T2 930 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 RDH14Q9HBH5 336 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 PHPT1Q9NRX4 125 aaPredicted RBP13.92□□□□□ -0.18
SEC13-211ENST00000431352 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.92□□□□□ -0.18
SEC13-211ENST00000431352 SPATS2LQ9NUQ6 558 aaKnown RBP13.92□□□□□ -0.18
SEC13-211ENST00000431352 ETNK2Q9NVF9 386 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 FOXJ2Q9P0K8 574 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 APPL1Q9UKG1 709 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 MYO6Q9UM54 1294 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 SCINQ9Y6U3 715 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 COL6A6A6NMZ7 2263 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 AHCTF1Q8WYP5 2266 aa13.92□□□□□ -0.18
SEC13-211ENST00000431352 ASH1LQ9NR48 2969 aaKnown RBP13.91□□□□□ -0.18
SEC13-211ENST00000431352 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.91□□□□□ -0.18
SEC13-211ENST00000431352 RHPN2P1A8MT19 583 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 GOLGA6L22H0YM25 854 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 TNFRSF10CO14798 259 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 EFSO43281 561 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 SOCS5O75159 536 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 HEXIM1O94992 359 aaKnown RBP13.91□□□□□ -0.18
SEC13-211ENST00000431352 SKILP12757 684 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 AK4P27144 223 aaPredicted RBP13.91□□□□□ -0.18
SEC13-211ENST00000431352 ALDH4A1P30038 563 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 VIPR1P32241 457 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 TRIM23P36406 574 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 ARL4AP40617 200 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 OR1D5P58170 312 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 KLHL30Q0D2K2 578 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 ILF3Q12906 894 aaKnown RBP eCLIP13.91□□□□□ -0.181e-6■■■□□ 16.4
SEC13-211ENST00000431352 TRAF2Q12933 501 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 RAET1GQ6H3X3 334 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 OGFOD3Q6PK18 319 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 PRICKLE2Q7Z3G6 844 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 HSD11B1LQ7Z5J1 315 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 ZFAND4Q86XD8 727 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 PGBD5Q8N414 524 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.91□□□□□ -0.18
SEC13-211ENST00000431352 LZTR1Q8N653 840 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 FNIP1Q8TF40 1166 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 USP7Q93009 1102 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 ZNF599Q96NL3 588 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 CMKLR1Q99788 373 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 GSDMCQ9BYG8 508 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 ZMYND15Q9H091 742 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 NOD2Q9HC29 1040 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 RTN4Q9NQC3 1192 aaKnown RBP13.91□□□□□ -0.18
SEC13-211ENST00000431352 TAAR2Q9P1P5 351 aa13.91□□□□□ -0.18
SEC13-211ENST00000431352 A0A0U1RQS6 177 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 NPIPB15A6NHN6 443 aaPredicted RBP13.9□□□□□ -0.18
SEC13-211ENST00000431352 B8ZZF3 427 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 PDE2AO00408 941 aaPredicted RBP13.9□□□□□ -0.18
SEC13-211ENST00000431352 NUDT21O43809 227 aaKnown RBP13.9□□□□□ -0.18
SEC13-211ENST00000431352 SLC28A2O43868 658 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 HOXC4P09017 264 aaPredicted RBP13.9□□□□□ -0.18
SEC13-211ENST00000431352 LIPCP11150 499 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 CCNB1P14635 433 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 PNLIPP16233 465 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 CTPS1P17812 591 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 LHCGRP22888 699 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 MMP13P45452 471 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 POLD2P49005 469 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 HCAR3P49019 387 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 CDK3Q00526 305 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 ZFP36L1Q07352 338 aaKnown RBP13.9□□□□□ -0.18
SEC13-211ENST00000431352 C16orf72Q14CZ0 275 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 TSR1Q2NL82 804 aaKnown RBP13.9□□□□□ -0.18
SEC13-211ENST00000431352 MANEAQ5SRI9 462 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 TSPAN33Q86UF1 283 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 PSTKQ8IV42 348 aaKnown RBP13.9□□□□□ -0.18
SEC13-211ENST00000431352 SLITRK4Q8IW52 837 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 BBS5Q8N3I7 341 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 RCBTB1Q8NDN9 531 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 ZDHHC1Q8WTX9 485 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 NSMCE1Q8WV22 266 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 PATE1Q8WXA2 126 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 JPH3Q8WXH2 748 aaPredicted RBP13.9□□□□□ -0.18
SEC13-211ENST00000431352 EXTL1Q92935 676 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 DTD2Q96FN9 168 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 CSPG4P5Q96PW8 444 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 NUDCD1Q96RS6 583 aa13.9□□□□□ -0.18
SEC13-211ENST00000431352 MGME1Q9BQP7 344 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms