RNA–Protein interactions for RNA: ENST00000429895.5

PTPRF-206, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 1 (best)

Gene PTPRF, Length 6,312 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-206ENST00000429895 UBE2QL1A1L167 161 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 WTIPA6NIX2 430 aaPredicted RBP15.41■□□□□ 0.06
PTPRF-206ENST00000429895 PRMT3O60678 531 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 ZBTB11O95625 1053 aaPredicted RBP15.41■□□□□ 0.06
PTPRF-206ENST00000429895 SMIM11AP58511 58 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 SCRN3Q0VDG4 424 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 UGCGQ16739 394 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 C9orf64Q5T6V5 341 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 C10orf107Q8IVU9 208 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 LMLNQ96KR4 655 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 EPHA3P29320 983 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 METTL3Q86U44 580 aaKnown RBP15.41■□□□□ 0.06
PTPRF-206ENST00000429895 OR14C36Q8NHC7 312 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 NDRG1Q92597 394 aaKnown RBP15.41■□□□□ 0.06
PTPRF-206ENST00000429895 BHLHE41Q9C0J9 482 aaPredicted RBP15.41■□□□□ 0.06
PTPRF-206ENST00000429895 CCNDBP1O95273 360 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 ITGA2BP08514 1039 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 SLC6A2P23975 617 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 CHSY3Q70JA7 882 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 PLPPR4Q7Z2D5 763 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 ING5Q8WYH8 240 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 DUSP16Q9BY84 665 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 SAR1AQ9NR31 198 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 IQCF5A8MTL0 148 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 ASGR1P07306 291 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 S100GP29377 79 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 UGT1A5P35504 534 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 RPL7AP62424 266 aaKnown RBP15.41■□□□□ 0.06
PTPRF-206ENST00000429895 LIN54Q6MZP7 749 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 FBXW8Q8N3Y1 598 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 OR7A2PQ8NGA2 310 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 STK32AQ8WU08 396 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 DLG3Q92796 817 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 EGFL7Q9UHF1 273 aa15.41■□□□□ 0.06
PTPRF-206ENST00000429895 STBD1O95210 358 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 MARCKSL1P49006 195 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 FLT3LGP49771 235 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 TRIM40Q6P9F5 258 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 TXNDC11Q6PKC3 985 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 OTOP2Q7RTS6 562 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 AENQ8WTP8 325 aaKnown RBP15.4■□□□□ 0.06
PTPRF-206ENST00000429895 BTBD3Q9Y2F9 522 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 GLUD2P49448 558 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 EEF1DP3Q658K8 133 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 CXXC5Q7LFL8 322 aaKnown RBP15.4■□□□□ 0.06
PTPRF-206ENST00000429895 PMEPA1Q969W9 287 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 TP53INP1Q96A56 240 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 SNX15Q9NRS6 342 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 GMIPQ9P107 970 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 ZNF510Q9Y2H8 683 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 UBIAD1Q9Y5Z9 338 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 PTPRMP28827 1452 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 STX16-NPEPL1H3BU86 382 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 STX16O14662 325 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 EPHX1P07099 455 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 AQP1P29972 269 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 CDH13P55290 713 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 ANXA8L1Q5VT79 327 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 PTCHD4Q6ZW05 846 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 CHST9Q7L1S5 443 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 ADCY4Q8NFM4 1077 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 KCNMB3Q9NPA1 279 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 ABCB10Q9NRK6 738 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 MRPS33Q9Y291 106 aaKnown RBP15.4■□□□□ 0.06
PTPRF-206ENST00000429895 AZIN1O14977 448 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 ERBB2P04626 1255 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 AMIGO2Q86SJ2 522 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 C17orf64Q86WR6 236 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 TRIM63Q969Q1 353 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 WRAP53Q9BUR4 548 aaKnown RBP15.4■□□□□ 0.06
PTPRF-206ENST00000429895 ACSS2Q9NR19 701 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 LRCH1Q9Y2L9 728 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 MBTD1Q05BQ5 628 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 LGALS3BPQ08380 585 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 TAF10Q12962 218 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 C9orf57Q5W0N0 161 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 CHADLQ6NUI6 762 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 CREG2Q8IUH2 290 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 LRRC49Q8IUZ0 686 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 ZNF670Q9BS34 389 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 MECRQ9BV79 373 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 C3orf14Q9HBI5 128 aa15.4■□□□□ 0.06
PTPRF-206ENST00000429895 EVLQ9UI08 416 aaPredicted RBP15.4■□□□□ 0.06
PTPRF-206ENST00000429895 MAGEB3O15480 346 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 VIPP01282 170 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 UGT2B4P06133 528 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 MATKP42679 507 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 ZNF155Q12901 538 aaPredicted RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 MED22Q15528 200 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 CERCAMQ5T4B2 595 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 KLHL35Q6PF15 583 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 RHBDF2Q6PJF5 856 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 JAZF1Q86VZ6 243 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 MCCC1Q96RQ3 725 aaPredicted RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 ACE2Q9BYF1 805 aaPredicted RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 CRNNQ9UBG3 495 aaPredicted RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 TBC1D30Q9Y2I9 924 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 PCDHGC5Q9Y5F6 944 aa15.39■□□□□ 0.05
PTPRF-206ENST00000429895 CORO1AP31146 461 aaKnown RBP15.39■□□□□ 0.05
PTPRF-206ENST00000429895 ZNF132P52740 706 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms