RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 NTRK1P04629 796 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 ALDH4A1P30038 563 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 RRM2P31350 389 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 CA9Q16790 459 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 PIGVQ9NUD9 493 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 COG5Q9UP83 839 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 JAM2P57087 298 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 DEFB103AP81534 67 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 CACNG1Q06432 222 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 TJAP1Q5JTD0 557 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 TMEM120AQ9BXJ8 343 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 GBA3Q9H227 469 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 MIOSQ9NXC5 875 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 NOP53Q9NZM5 478 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 PKMP14618 531 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 ZNF776Q68DI1 518 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 P2RY13Q9BPV8 354 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 CRTAC1Q9NQ79 661 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 KCTD5Q9NXV2 234 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 MRPS33Q9Y291 106 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 CDKN2BP42772 138 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 CDK7P50613 346 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 NEK3P51956 506 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 CAPN13Q6MZZ7 669 aaPredicted RBP17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 GDPD4Q6W3E5 623 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 ZNF567Q8N184 647 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 GALNT4Q8N4A0 578 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 ASB2Q96Q27 587 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 SUV39H2Q9H5I1 410 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 INVSQ9Y283 1065 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 R3HDM2Q9Y2K5 976 aaKnown RBP17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 LAMTOR5O43504 91 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 CHRNB2P17787 502 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 PRKAA2P54646 552 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 TERF2Q15554 542 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 RTP2Q5QGT7 225 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 STX19Q8N4C7 294 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 SPPL2AQ8TCT8 520 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 STYXQ8WUJ0 223 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 CD101Q93033 1021 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 OR2AG1Q9H205 316 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 RERGLQ9H628 205 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 WDR26Q9H7D7 661 aa17.1■□□□□ 0.33
SMARCA4-203ENST00000429416 COL2A1P02458 1487 aaPredicted RBP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 SDK1Q7Z5N4 2213 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 MEIS3P2A8K0S8 358 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 UBXN8O00124 270 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 HNRNPA1P09651 372 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 CHRNB3Q05901 458 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 SOX4Q06945 474 aaPredicted RBP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 GNA13Q14344 377 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 HNRNPLLQ8WVV9 542 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 CDH19Q9H159 772 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 MINDY4Q4G0A6 757 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 NECTIN4Q96NY8 510 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 SIX4Q9UIU6 781 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 BAZ2AQ9UIF9 1905 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 GOLGA4Q13439 2230 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 B4DGG1 531 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 PEX11AO75192 247 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 DNAJC8O75937 253 aaPredicted RBP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 CCNDBP1O95273 360 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 ITGA2BP08514 1039 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 TARSP26639 723 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 CRYMQ14894 314 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 UBXN11Q5T124 520 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 HGSNATQ68CP4 663 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 INPP5DQ92835 1189 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 CLP1Q92989 425 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 QKIQ96PU8 341 aaKnown RBP eCLIP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 EIF4E1BA6NMX2 242 aaKnown RBP17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 PIRO00625 290 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 FAM163BP0C2L3 166 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 EPORP19235 508 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 TADA1Q96BN2 335 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 CAB39LQ9H9S4 337 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 PCDH12Q9NPG4 1184 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 THAP1Q9NVV9 213 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 IMPAD1Q9NX62 359 aa17.09■□□□□ 0.33
SMARCA4-203ENST00000429416 CFAP73A6NFT4 308 aa17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 CCDC154A6NI56 674 aa17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 PSMA4P25789 261 aaKnown RBP17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 IFI35P80217 286 aaPredicted RBP17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 CYTH1Q15438 398 aa17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 FKBPLQ9UIM3 349 aa17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 EDDM13A0A1B0GTR0 161 aa17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 ATP6V0D1P61421 351 aa17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 WDR5P61964 334 aaKnown RBP17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 MSLNQ13421 630 aaPredicted RBP17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 TMPRSS11BQ86T26 416 aa17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 CDK20Q8IZL9 346 aa17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 TRIT1Q9H3H1 467 aaKnown RBP17.08■□□□□ 0.33
SMARCA4-203ENST00000429416 HEPACAM2A8MVW5 462 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 SSR2P43308 183 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 ARRB1P49407 418 aaPredicted RBP17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 GHRHRQ02643 423 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 INAVAQ3KP66 663 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 CERS6Q6ZMG9 384 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 PRSS58Q8IYP2 241 aa17.08■□□□□ 0.32
SMARCA4-203ENST00000429416 NUS1Q96E22 293 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms