RNA–Protein interactions for RNA: ENST00000428552.1

CSTF1-203, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 3

Gene CSTF1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-203ENST00000428552 CSMD2Q7Z408 3487 aa8.06□□□□□ -1.12
CSTF1-203ENST00000428552 AKAP9Q99996 3911 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CFAP69A5D8W1 941 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CACNB4O00305 520 aaPredicted RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 FOXN3O00409 490 aaPredicted RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 BUB1O43683 1085 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 RAMP2O60895 175 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 VPS4BO75351 444 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 STK17BO94768 372 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 SORBS2O94875 1100 aaKnown RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 TCN2P20062 427 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 TNFRSF8P28908 595 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 USP8P40818 1118 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 RHOAP61586 193 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 KRT85P78386 507 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 AFMIDQ63HM1 303 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 ISM2Q6H9L7 571 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 RWDD4Q6NW29 188 aaKnown RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 PNCKQ6P2M8 343 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 ZNF761Q86XN6 746 aaPredicted RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CAMK1DQ8IU85 385 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CCDC13Q8IYE1 715 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 NRSN1Q8IZ57 195 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CCDC185Q8N715 623 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 EMC1Q8N766 993 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 TEX19Q8NA77 164 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CCDC112Q8NEF3 446 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CPT1CQ8TCG5 803 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CASKIN2Q8WXE0 1202 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 ECHDC3Q96DC8 303 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 TCTN2Q96GX1 697 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 TEFMQ96QE5 360 aaKnown RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 RETREG1Q9H6L5 497 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CARS2Q9HA77 564 aaKnown RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 PDFQ9HBH1 243 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 CUEDC1Q9NWM3 386 aaPredicted RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 TRNAU1APQ9NX07 287 aaKnown RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 SIDT1Q9NXL6 827 aaKnown RBP8.05□□□□□ -1.12
CSTF1-203ENST00000428552 APEX2Q9UBZ4 518 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 TLK1Q9UKI8 766 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 VPS4AQ9UN37 437 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 PLEKHM1Q9Y4G2 1056 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 MAP4K5Q9Y4K4 846 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 KCTD3Q9Y597 815 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 MED13Q9UHV7 2174 aa8.05□□□□□ -1.12
CSTF1-203ENST00000428552 TNRC6AQ8NDV7 1962 aaKnown RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 ZSCAN5CA6NGD5 496 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 GOLGA8SH3BPF8 625 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 PSMA7O14818 248 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 DNAJB5O75953 348 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 EML2O95834 649 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 MYCLP1P12525 358 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 ZNF28P17035 718 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 KELP23276 732 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 POLD2P49005 469 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 ATP11AP98196 1134 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 CTBSQ01459 385 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 MC1RQ01726 317 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 RAD51Q06609 339 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 SEPT6Q14141 434 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 C15orf59Q2T9L4 293 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 CCDC14Q49A88 953 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 PRR30Q53SZ7 412 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 C1QL3Q5VWW1 255 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 BRAT1Q6PJG6 821 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 SLC30A9Q6PML9 568 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 ARCQ7LC44 396 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 MAMDC2Q7Z304 686 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 DNAAF5Q86Y56 855 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 FAM71AQ8IYT1 594 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 PYROXD2Q8N2H3 581 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 CBARPQ8N350 705 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 NELFBQ8WX92 580 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 KIAA1143Q96AT1 154 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 C18orf8Q96DM3 657 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 TBC1D31Q96DN5 1066 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 RNF31Q96EP0 1072 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 COQ10AQ96MF6 247 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 ZNF641Q96N77 438 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 EFHD1Q9BUP0 239 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 TEX101Q9BY14 249 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 GSDMCQ9BYG8 508 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 TRIM55Q9BYV6 548 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 ZNF768Q9H5H4 540 aaKnown RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 SYNCQ9H7C4 482 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 WDR26Q9H7D7 661 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 SUDS3Q9H7L9 328 aaPredicted RBP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 FBXO8Q9NRD0 319 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 TMEM51Q9NW97 253 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 MAN1B1Q9UKM7 699 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 HPCAL4Q9UM19 191 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 SUFUQ9UMX1 484 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.04□□□□□ -1.12
CSTF1-203ENST00000428552 RPS6KL1Q9Y6S9 549 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 PDZD2O15018 2839 aa8.04□□□□□ -1.12
CSTF1-203ENST00000428552 HIVEP3Q5T1R4 2406 aa8.03□□□□□ -1.12
CSTF1-203ENST00000428552 PRRC2CQ9Y520 2896 aaKnown RBP8.03□□□□□ -1.12
CSTF1-203ENST00000428552 A8MU76 341 aa8.03□□□□□ -1.12
CSTF1-203ENST00000428552 TCP11X1B4DZS4 312 aa8.03□□□□□ -1.12
CSTF1-203ENST00000428552 RASA4BC9J798 803 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms