RNA–Protein interactions for RNA: ENST00000427943.1

PSPC1-202, Transcript of paraspeckle component 1, humanhuman

TSL 5

Gene PSPC1, Length 866 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-202ENST00000427943 ARL10Q8N8L6 244 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 SLC35G2Q8TBE7 412 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 SCG3Q8WXD2 468 aaKnown RBP18.42■□□□□ 0.54
PSPC1-202ENST00000427943 RAPGEF5Q92565 580 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 MAML1Q92585 1016 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 NAT6Q93015 286 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 DTD2Q96FN9 168 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 CCDC42Q96M95 316 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 CCDC3Q9BQI4 270 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 SUDS3Q9H7L9 328 aaPredicted RBP18.42■□□□□ 0.54
PSPC1-202ENST00000427943 NHEJ1Q9H9Q4 299 aaPredicted RBP18.42■□□□□ 0.54
PSPC1-202ENST00000427943 GOLGA6AQ9NYA3 693 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 LCMT1Q9UIC8 334 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 GPR34Q9UPC5 381 aa18.42■□□□□ 0.54
PSPC1-202ENST00000427943 LRRD1A4D1F6 860 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 MATN3O15232 486 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 HLA-DQB2P05538 268 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 KELP23276 732 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 KDELR1P24390 212 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 NFKBIAP25963 317 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 ITPKBP27987 946 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 TRIM23P36406 574 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 ABCG1P45844 678 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 GABREP78334 506 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 SLC10A2Q12908 348 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-202ENST00000427943 ARHGEF7Q14155 803 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 IHHQ14623 411 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 ISXQ2M1V0 245 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 Q6ZVL8 140 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 HEATR4Q86WZ0 1026 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 PIH1D2Q8WWB5 315 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 SCRN2Q96FV2 425 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 MCCC1Q96RQ3 725 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-202ENST00000427943 RBM15Q96T37 977 aaKnown RBP eCLIP18.41■□□□□ 0.543e-7■■■■□ 24.9
PSPC1-202ENST00000427943 CYP4F12Q9HCS2 524 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 RBM22Q9NW64 420 aaKnown RBP eCLIP18.41■□□□□ 0.54
PSPC1-202ENST00000427943 DGKBQ9Y6T7 804 aa18.41■□□□□ 0.54
PSPC1-202ENST00000427943 CACNA1GO43497 2377 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 PRSS38A1L453 326 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 FZD6O60353 706 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 MYCLP1P12525 358 aaPredicted RBP18.4■□□□□ 0.54
PSPC1-202ENST00000427943 CCNCP24863 283 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 EIF2S3P41091 472 aaKnown RBP18.4■□□□□ 0.54
PSPC1-202ENST00000427943 TBC1D25Q3MII6 688 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 C3orf38Q5JPI3 329 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 RAET1GQ6H3X3 334 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 LVRNQ6Q4G3 990 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 RBM44Q6ZP01 1051 aaKnown RBP18.4■□□□□ 0.54
PSPC1-202ENST00000427943 SFTPA2Q8IWL1 248 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 CCNYQ8ND76 341 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 CCL4L1Q8NHW4 92 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 SNIP1Q8TAD8 396 aaKnown RBP18.4■□□□□ 0.54
PSPC1-202ENST00000427943 CCDC74AQ96AQ1 378 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 RNF157Q96PX1 679 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 TMEM168Q9H0V1 697 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 DTLQ9NZJ0 730 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 CD84Q9UIB8 345 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 RABGEF1Q9UJ41 708 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 CHKBQ9Y259 395 aa18.4■□□□□ 0.54
PSPC1-202ENST00000427943 UNC13CQ8NB66 2214 aa18.39■□□□□ 0.54
PSPC1-202ENST00000427943 PSMD11O00231 422 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 HOXC4P09017 264 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-202ENST00000427943 CCNB1P14635 433 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 HOXB3P14651 431 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-202ENST00000427943 ACTN2P35609 894 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 EPHB1P54762 984 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 FAM182AQ5T1J6 154 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 LRRC66Q68CR7 880 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 ALG1LQ6GMV1 187 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 RFLNAQ6ZTI6 216 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 TAF8Q7Z7C8 310 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 RHOT2Q8IXI1 618 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 CBARPQ8N350 705 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-202ENST00000427943 SDR16C5Q8N3Y7 309 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 TPCN2Q8NHX9 752 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 FGF11Q92914 225 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 HDAC11Q96DB2 347 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 ATXN7L3BQ96GX2 97 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 TSGA13Q96PP4 275 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 TDRD1Q9BXT4 1180 aaKnown RBP18.39■□□□□ 0.53
PSPC1-202ENST00000427943 PHPT1Q9NRX4 125 aaPredicted RBP18.39■□□□□ 0.53
PSPC1-202ENST00000427943 SATB2Q9UPW6 733 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 PPIL1Q9Y3C6 166 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 ENTPD2Q9Y5L3 495 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 SCN8AQ9UQD0 1980 aa18.39■□□□□ 0.53
PSPC1-202ENST00000427943 B4DGG1 531 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 AKR1B15C9JRZ8 316 aaPredicted RBP18.38■□□□□ 0.53
PSPC1-202ENST00000427943 TNFRSF10CO14798 259 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 KRT1P04264 644 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 TNNT1P13805 278 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 MX2P20592 715 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 CDK3Q00526 305 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 NIPAL4Q0D2K0 466 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 CCDC173Q0VFZ6 552 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 SPIDRQ14159 915 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 LRRC69Q6ZNQ3 347 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 CNGA4Q8IV77 575 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 CCDC13Q8IYE1 715 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 PLD5Q8N7P1 536 aa18.38■□□□□ 0.53
PSPC1-202ENST00000427943 ARRDC2Q8TBH0 407 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms