RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ZRANB2O95218 330 aaKnown RBP eCLIP20.67■□□□□ 0.9
HSPG2-205ENST00000427897 NDUFA10O95299 355 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 GP1BAP07359 652 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 ETV3P41162 512 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 KIAA1024LP59773 190 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 INSM1Q01101 510 aaPredicted RBP20.67■□□□□ 0.9
HSPG2-205ENST00000427897 CYP4F3Q08477 520 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 C6orf132Q5T0Z8 1188 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 RAET1GQ6H3X3 334 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 MFSD7Q6UXD7 560 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 NPNTQ6UXI9 565 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 EFL1Q7Z2Z2 1120 aaKnown RBP20.67■□□□□ 0.9
HSPG2-205ENST00000427897 HSD11B1LQ7Z5J1 315 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 LPCAT1Q8NF37 534 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 ADGRE3Q9BY15 652 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 BRD8Q9H0E9 1235 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 GRPEL1Q9HAV7 217 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 CYP4F12Q9HCS2 524 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 PPIL1Q9Y3C6 166 aa20.67■□□□□ 0.9
HSPG2-205ENST00000427897 A0A0A6YYK5 440 aaPredicted RBP20.66■□□□□ 0.9
HSPG2-205ENST00000427897 SOWAHDA6NJG2 315 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 MT-CO3P00414 261 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 HOXC4P09017 264 aaPredicted RBP20.66■□□□□ 0.9
HSPG2-205ENST00000427897 ZNF30P17039 623 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 CD86P42081 329 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 GPR1P46091 355 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 LLGL1Q15334 1064 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 LVRNQ6Q4G3 990 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 Q6ZVL8 140 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 TAF8Q7Z7C8 310 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 TSPAN33Q86UF1 283 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 RCOR2Q8IZ40 523 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 DTD2Q96FN9 168 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 CALR3Q96L12 384 aaKnown RBP20.66■□□□□ 0.9
HSPG2-205ENST00000427897 AGAP3Q96P47 875 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 TDRD1Q9BXT4 1180 aaKnown RBP20.66■□□□□ 0.9
HSPG2-205ENST00000427897 CLPBQ9H078 707 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 SUDS3Q9H7L9 328 aaPredicted RBP20.66■□□□□ 0.9
HSPG2-205ENST00000427897 SIRPGQ9P1W8 387 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 PNMA8BQ9ULN7 279 aaPredicted RBP20.66■□□□□ 0.9
HSPG2-205ENST00000427897 TFR2Q9UP52 801 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 GPR34Q9UPC5 381 aa20.66■□□□□ 0.9
HSPG2-205ENST00000427897 A0A0J9YYE9 177 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 TMEM202A6NGA9 273 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 SRRM3A6NNA2 597 aaPredicted RBP20.65■□□□□ 0.9
HSPG2-205ENST00000427897 GOLGA6L6A8MZA4 724 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 TNFRSF10CO14798 259 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 OPA1O60313 960 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 CST8O60676 142 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 TRBC1P01850 177 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 LHCGRP22888 699 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 TRIM23P36406 574 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 NR2C2P49116 596 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 RPL26P61254 145 aaKnown RBP20.65■□□□□ 0.9
HSPG2-205ENST00000427897 IFI35P80217 286 aaPredicted RBP20.65■□□□□ 0.9
HSPG2-205ENST00000427897 NIPAL4Q0D2K0 466 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 PTPRRQ15256 657 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 TFDP3Q5H9I0 405 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 CCDC181Q5TID7 509 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 LRRC66Q68CR7 880 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 ALG1LQ6GMV1 187 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 CCDC70Q6NSX1 233 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 CRTC1Q6UUV9 634 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 SPOCD1Q6ZMY3 1216 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 KIAA1328Q86T90 577 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 ARRDC2Q8TBH0 407 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 CCHCR1Q8TD31 782 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 P3H4Q92791 437 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 NAT6Q93015 286 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 NXPE2Q96DL1 559 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 RBM41Q96IZ5 413 aaKnown RBP20.65■□□□□ 0.9
HSPG2-205ENST00000427897 MCCC1Q96RQ3 725 aaPredicted RBP20.65■□□□□ 0.9
HSPG2-205ENST00000427897 MLPHQ9BV36 600 aaPredicted RBP20.65■□□□□ 0.9
HSPG2-205ENST00000427897 CEP41Q9BYV8 373 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 GOLPH3Q9H4A6 298 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 SYNDIG1Q9H7V2 258 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 MRPL40Q9NQ50 206 aaKnown RBP20.65■□□□□ 0.9
HSPG2-205ENST00000427897 CD84Q9UIB8 345 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 PADI4Q9UM07 663 aa20.65■□□□□ 0.9
HSPG2-205ENST00000427897 RPL26L1Q9UNX3 145 aaKnown RBP20.65■□□□□ 0.9
HSPG2-205ENST00000427897 FZD6O60353 706 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 MYCLP1P12525 358 aaPredicted RBP20.64■□□□□ 0.89
HSPG2-205ENST00000427897 GM2AP17900 193 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 CDKN2BP42772 138 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 TNNT3P45378 269 aaPredicted RBP20.64■□□□□ 0.89
HSPG2-205ENST00000427897 C11orf63Q6NUN7 778 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 GUSBP11Q6P575 273 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 KDELC2Q7Z4H8 507 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 NT5DC3Q86UY8 548 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 HEATR4Q86WZ0 1026 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 PROSER1Q86XN7 944 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 TFB1MQ8WVM0 346 aaKnown RBP20.64■□□□□ 0.89
HSPG2-205ENST00000427897 OR1E3Q8WZA6 343 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 AP2M1Q96CW1 435 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 PDXPQ96GD0 296 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 DEPDC7Q96QD5 511 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 BOCQ9BWV1 1114 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 LGR4Q9BXB1 951 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 DGKBQ9Y6T7 804 aa20.64■□□□□ 0.89
HSPG2-205ENST00000427897 EME2A4GXA9 379 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms