RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 GPBAR1Q8TDU6 330 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 CSPG4P5Q96PW8 444 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 TEX101Q9BY14 249 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 STRADBQ9C0K7 418 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 NAT10Q9H0A0 1025 aaKnown RBP13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 NOD2Q9HC29 1040 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 LRIT1Q9P2V4 623 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 MYO1AQ9UBC5 1043 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 LOXL2Q9Y4K0 774 aa13.07□□□□□ -0.32
DEPDC7-203ENST00000427755 A0A1W2PQ67 120 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 CAPN8A6NHC0 703 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 B4DGG1 531 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 GOLGA6L22H0YM25 854 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 NUDT21O43809 227 aaKnown RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 CEACAM5P06731 702 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 RARAP10276 462 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 MYCLP1P12525 358 aaPredicted RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 VIPR1P32241 457 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 HSPA9P38646 679 aaKnown RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 B4GALNT1Q00973 533 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 LY6DQ14210 128 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 ZNF235Q14590 738 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 PTPRRQ15256 657 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 ZSCAN23Q3MJ62 389 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 BOLA3Q53S33 107 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 HGSNATQ68CP4 663 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 TMCO3Q6UWJ1 677 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 CCDC81Q6ZN84 652 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 HSD11B1LQ7Z5J1 315 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 HEATR4Q86WZ0 1026 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 SLITRK4Q8IW52 837 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 PAF1Q8N7H5 531 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 PTCD2Q8WV60 388 aaKnown RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 NUS1Q96E22 293 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 TRIM11Q96F44 468 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 DTD2Q96FN9 168 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 MCCC1Q96RQ3 725 aaPredicted RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 CCNL2Q96S94 520 aaPredicted RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 FRMD8Q9BZ67 464 aaPredicted RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 DPEP2Q9H4A9 486 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 MRPL47Q9HD33 250 aaKnown RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 SPATS2LQ9NUQ6 558 aaKnown RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 PISDQ9UG56 409 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 ST14Q9Y5Y6 855 aa13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 HELZ2Q9BYK8 2649 aaKnown RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 GCN1Q92616 2671 aaKnown RBP13.06□□□□□ -0.32
DEPDC7-203ENST00000427755 KALRNO60229 2985 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 NPIPB15A6NHN6 443 aaPredicted RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 SMTNL1A8MU46 457 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 PDE2AO00408 941 aaPredicted RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 NVLO15381 856 aaKnown RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 B4GAT1O43505 415 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 PGLSO95336 258 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 CPP00450 1065 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 FGF1P05230 155 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 CCNB1P14635 433 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 ITIH1P19827 911 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 ARL4AP40617 200 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 ETV3P41162 512 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 MAZP56270 477 aaKnown RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 MAXP61244 160 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 CDK3Q00526 305 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 SLC25A11Q02978 314 aaKnown RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 SRSF6Q13247 344 aaKnown RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 NR1I3Q14994 352 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 TGIF1Q15583 401 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 TSR1Q2NL82 804 aaKnown RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 FILIP1LQ4L180 1135 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 ZNF438Q7Z4V0 828 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 TSPAN33Q86UF1 283 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 NIPA2Q8N8Q9 360 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 PDCD6IPQ8WUM4 868 aaKnown RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 TEKT4Q8WW24 435 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 HSPH1Q92598 858 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 SCRN2Q96FV2 425 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 CARS2Q9HA77 564 aaKnown RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 PCDH18Q9HCL0 1135 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 PHPT1Q9NRX4 125 aaPredicted RBP13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 MOSPD1Q9UJG1 213 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 PHTF1Q9UMS5 762 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 PPIL1Q9Y3C6 166 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 ZNF462Q96JM2 2506 aa13.05□□□□□ -0.32
DEPDC7-203ENST00000427755 SHROOM3Q8TF72 1996 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 A0A0U1RQS6 177 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 PSMD11O00231 422 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 SOD1P00441 154 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 JMJD7P0C870 316 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 IL4RP24394 825 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 TEAD1P28347 426 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 ETV5P41161 510 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 ARHGEF7Q14155 803 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 PIGHQ14442 188 aaPredicted RBP13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 NR1D2Q14995 579 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 IQCB1Q15051 598 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 FIGNQ5HY92 759 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 RALGPS1Q5JS13 557 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 DENND2CQ68D51 928 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 RFLNAQ6ZTI6 216 aa13.04□□□□□ -0.32
DEPDC7-203ENST00000427755 Q6ZVL8 140 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms