RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 TMCC1O94876 653 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 GSRP00390 522 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 ATXN1LP0C7T5 689 aaKnown RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 KPNA2P52292 529 aaKnown RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 HK2P52789 917 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 AQP5P55064 265 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 NAA20P61599 178 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 ARHGAP8P85298 464 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 DLG1Q12959 904 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 KCNC3Q14003 757 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 CYTH1Q15438 398 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 IL31Q6EBC2 164 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 PGBD5Q8N414 524 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 ARL14EPQ8N8R7 260 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 SHKBP1Q8TBC3 707 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 WFIKKN2Q8TEU8 576 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 ZNF669Q96BR6 464 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 DGCR14Q96DF8 476 aaKnown RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 DNAJC1Q96KC8 554 aaKnown RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 PLEKHG4BQ96PX9 1271 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 MECRQ9BV79 373 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 KLHL4Q9C0H6 718 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 SFXN1Q9H9B4 322 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 MAN1C1Q9NR34 630 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 NDUFA13Q9P0J0 144 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 ZNF106Q9H2Y7 1883 aaKnown RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 MEI4A8MW99 385 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 TRIM49D1C9J1S8 452 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 H0Y626 953 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 COPEO14579 308 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 TBL1XO60907 577 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 MOSPD3O75425 235 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 TPP2P29144 1249 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 LEPRP48357 1165 aaKnown RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 AQP4P55087 323 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 BST1Q10588 318 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 PDK3Q15120 406 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 TAF1AQ15573 450 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 ZNF77Q15935 545 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 HSF5Q4G112 596 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 RNF219Q5W0B1 726 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 AAGABQ6PD74 315 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 NCEH1Q6PIU2 408 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 CTAGE3PQ8IX95 158 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 TDRD5Q8NAT2 981 aaKnown RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 HIPK4Q8NE63 616 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 IPMKQ8NFU5 416 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 AUTS2Q8WXX7 1259 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 ZNF419Q96HQ0 510 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 FCRL3Q96P31 734 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 SLC46A2Q9BY10 475 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 CPEB1Q9BZB8 566 aaKnown RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 FAM96AQ9H5X1 160 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 ZNF395Q9H8N7 513 aaPredicted RBP8.56□□□□□ -1.04
SH3D19-204ENST00000427414 GKN1Q9NS71 199 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 FBXO10Q9UK96 956 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 PPIL1Q9Y3C6 166 aa8.56□□□□□ -1.04
SH3D19-204ENST00000427414 A0A087X1B8 175 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 HSFX4A0A1B0GTS1 333 aaPredicted RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CCDC195A0A1B0GUA6 201 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 HSFX3A0A1B0GWH4 333 aaPredicted RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CXorf49A8MYA2 514 aaPredicted RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 PFDN6O15212 129 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 BMP8BP34820 402 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 ACVRL1P37023 503 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CD86P42081 329 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 GRIA4P48058 902 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CLCN5P51795 746 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CHN2P52757 468 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 RPS24P62847 133 aaKnown RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 SLC25A3Q00325 362 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 POU4F1Q01851 419 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 GPM6BQ13491 265 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CAMK1Q14012 370 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 UBAP2LQ14157 1087 aaKnown RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 GRM2Q14416 872 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 PLPP4Q5VZY2 271 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 ZDHHC20Q5W0Z9 365 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 ATG16L1Q676U5 607 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 TXNDC8Q6A555 127 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 TRMT10BQ6PF06 316 aaKnown RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 TMCO2Q7Z6W1 182 aaPredicted RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 ADGRG6Q86SQ4 1221 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 EFHBQ8N7U6 833 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 GDPD5Q8WTR4 605 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 PABPC5Q96DU9 382 aaKnown RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 TSPAN17Q96FV3 270 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 SEMA3CQ99985 751 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 SCUBE2Q9NQ36 999 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 TDP1Q9NUW8 608 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 INTS10Q9NVR2 710 aaKnown RBP8.55□□□□□ -1.04
SH3D19-204ENST00000427414 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.55□□□□□ -1.044e-7■■■□□ 16.8
SH3D19-204ENST00000427414 ADAMTS6Q9UKP5 1117 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 HS3ST2Q9Y278 367 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 GBF1Q92538 1859 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 NUP205Q92621 2012 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 A0A088AWK7 358 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 GRM6O15303 877 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 FZD6O60353 706 aa8.55□□□□□ -1.04
SH3D19-204ENST00000427414 CKMP06732 381 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms