RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 WDR6Q9NNW5 1121 aaKnown RBP13.4□□□□□ -0.26
USP42-203ENST00000426246 CIDEBQ9UHD4 219 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 IQCF5A8MTL0 148 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 ANXA9O76027 345 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 CKBP12277 381 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 OR1E1P30953 314 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 MAGEA3P43357 314 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 KCNC1P48547 511 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 NPY2RP49146 381 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 PSMD7P51665 324 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 FOXA1P55317 472 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 NFYCQ13952 458 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 AAGABQ6PD74 315 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 CD300LGQ6UXG3 332 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 TTC9BQ8N6N2 239 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 CDYL2Q8N8U2 506 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 CLHC1Q8NHS4 586 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 NCLNQ969V3 563 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 ING2Q9H160 280 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 IGSF9Q9P2J2 1179 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 ASB3Q9Y575 518 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 MICAL3Q7RTP6 2002 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 COL4A4P53420 1690 aaPredicted RBP13.4□□□□□ -0.26
USP42-203ENST00000426246 A0A0U1RQF3 1178 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 TMX2-CTNND1H3BSU7 103 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 PCSK1P29120 753 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 SLC5A3P53794 718 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 DIO3P55073 304 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 STX5Q13190 355 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 ADGRE1Q14246 886 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 GPR107Q5VW38 600 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 LINGO4Q6UY18 593 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 TMEM135Q86UB9 458 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 HMCESQ96FZ2 354 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 PPM1MQ96MI6 270 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 GIT1Q9Y2X7 761 aa13.4□□□□□ -0.26
USP42-203ENST00000426246 H3BNX3 289 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 CBX4O00257 560 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 RTN3O95197 1032 aaPredicted RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 WARSP23381 471 aaKnown RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 RPL5P46777 297 aaKnown RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 STT3AP46977 705 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 DYNC1I2Q13409 638 aaKnown RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 ATP1A4Q13733 1029 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 DPYSQ14117 519 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 ALFQ53S48 1182 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 REP15Q6BDI9 236 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 RAB44Q7Z6P3 723 aaPredicted RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 RTN4RL1Q86UN2 441 aaPredicted RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 KBTBD6Q86V97 674 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 CLEC4FQ8N1N0 589 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 TOP6BLQ8N6T0 577 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 SLAIN1Q8ND83 568 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 THAP11Q96EK4 314 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 C3orf30Q96M34 536 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 DMAP1Q9NPF5 467 aaPredicted RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 RNF112Q9ULX5 631 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 UNC80Q8N2C7 3258 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 A0A0J9YYE9 177 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 A8MT66 165 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 PTGES3LE9PB15 166 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 ZNF195O14628 629 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 SNRPB2P08579 225 aaKnown RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 RPS6KA3P51812 740 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 GRB7Q14451 532 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 HECTD2Q5U5R9 776 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 LINC00523Q86TU6 105 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 HOMEZQ8IX15 550 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 ARHGAP18Q8N392 663 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 LINC01599Q8WXQ3 324 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 FBXL20Q96IG2 436 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 CD274Q9NZQ7 290 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 VWA7Q9Y334 891 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 PTCH2Q9Y6C5 1203 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 SQORQ9Y6N5 450 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 NLRC5Q86WI3 1866 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 TRPC5OSA6NMA1 111 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 E5RI56 91 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 BTN3A1O00481 513 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 PIP5K1BO14986 540 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 TNFAIP8O95379 198 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 HSPA8P11142 646 aaKnown RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 ATP5F1P24539 256 aaPredicted RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 ACVRL1P37023 503 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 ESRRGP62508 458 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 UPP1Q16831 310 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 TIFABQ6ZNK6 161 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 ZNF419Q96HQ0 510 aaPredicted RBP13.39□□□□□ -0.27
USP42-203ENST00000426246 NMUR1Q9HB89 426 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 SAGE1Q9NXZ1 904 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 SORCS3Q9UPU3 1222 aa13.39□□□□□ -0.27
USP42-203ENST00000426246 PTPRDP23468 1912 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 ARHGAP10A1A4S6 786 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 SDHDO14521 159 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 INPPL1O15357 1258 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 FKTNO75072 461 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 ALDH1A2O94788 518 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 IPO13O94829 963 aaKnown RBP13.38□□□□□ -0.27
USP42-203ENST00000426246 AGTR2P50052 363 aa13.38□□□□□ -0.27
USP42-203ENST00000426246 GEMP55040 296 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms