RNA–Protein interactions for RNA: ENST00000425836.6

VEGFA-209, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,575 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-209ENST00000425836 SHOC2Q9UQ13 582 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 HS3ST3A1Q9Y663 406 aa24.5■■□□□ 1.51
VEGFA-209ENST00000425836 ERI2A8K979 691 aaKnown RBP24.49■■□□□ 1.51
VEGFA-209ENST00000425836 CCDC188H7C350 402 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 URI1O94763 535 aaPredicted RBP24.49■■□□□ 1.51
VEGFA-209ENST00000425836 ECEL1O95672 775 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 CFIP05156 583 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 CD38P28907 300 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 ETV3P41162 512 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 LRRC14Q15048 493 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 CSRP2Q16527 193 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 TCEAL6Q6IPX3 200 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 GCNT7Q6ZNI0 430 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 Q6ZVL8 140 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 TECPR1Q7Z6L1 1165 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 TCEAL3Q969E4 200 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 LRRC45Q96CN5 670 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 EID2BQ96D98 161 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 BMFQ96LC9 184 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 SRPK1Q96SB4 655 aaKnown RBP24.49■■□□□ 1.51
VEGFA-209ENST00000425836 SLC6A14Q9UN76 642 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 ZNF711Q9Y462 761 aa24.49■■□□□ 1.51
VEGFA-209ENST00000425836 E7EVH7 732 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 H0Y8X5 98 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 KHNYNO15037 678 aaKnown RBP24.48■■□□□ 1.51
VEGFA-209ENST00000425836 GAS8O95995 478 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 VPS41P49754 854 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 IRX4P78413 519 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 RFLNAQ6ZTI6 216 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 SLCO2A1Q92959 643 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 FAM122AQ96E09 287 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 DTD2Q96FN9 168 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 ZFYVE1Q9HBF4 777 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 CDC23Q9UJX2 597 aa24.48■■□□□ 1.51
VEGFA-209ENST00000425836 TNRC6BQ9UPQ9 1833 aaKnown RBP24.48■■□□□ 1.51
VEGFA-209ENST00000425836 POM121BA6NF01 834 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 AURKAO14965 403 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 SUN1O94901 812 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 APRTP07741 180 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 PTGIRP43119 386 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 BASP1P80723 227 aaKnown RBP24.47■■□□□ 1.51
VEGFA-209ENST00000425836 GPS1Q13098 491 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 IRF4Q15306 451 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 SF3A2Q15428 464 aaKnown RBP24.47■■□□□ 1.51
VEGFA-209ENST00000425836 TEAD4Q15561 434 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 TMC3Q7Z5M5 1100 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 ABI3BPQ7Z7G0 1075 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 MFSD2AQ8NA29 543 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 SPATA4Q8NEY3 305 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 CCHCR1Q8TD31 782 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 GPR63Q9BZJ6 419 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 FSCN3Q9NQT6 498 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 CEP192Q8TEP8 1941 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 GON4LQ3T8J9 2241 aa24.47■■□□□ 1.51
VEGFA-209ENST00000425836 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP24.46■■□□□ 1.51
VEGFA-209ENST00000425836 A0A1B0GVT2 93 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 FPGTO14772 594 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 VILLO15195 856 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 IGFALSP35858 605 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 PLA2G5P39877 138 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 LMAN1P49257 510 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 MSLNQ13421 630 aaPredicted RBP24.46■■□□□ 1.51
VEGFA-209ENST00000425836 KDM7AQ6ZMT4 941 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 BLOC1S5Q8TDH9 187 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 NUS1Q96E22 293 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 NUSAP1Q9BXS6 441 aaKnown RBP24.46■■□□□ 1.51
VEGFA-209ENST00000425836 TRABDQ9H4I3 376 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 HACD3Q9P035 362 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 BNC1Q01954 994 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 LINC00523Q86TU6 105 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 IQCHQ86VS3 1027 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 RAVER1Q8IY67 606 aaKnown RBP24.46■■□□□ 1.51
VEGFA-209ENST00000425836 TTC30BQ8N4P2 665 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 RUNDC3BQ96NL0 473 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 EIF2B3Q9NR50 452 aaKnown RBP24.46■■□□□ 1.51
VEGFA-209ENST00000425836 KCTD5Q9NXV2 234 aa24.46■■□□□ 1.51
VEGFA-209ENST00000425836 GRIA1P42261 906 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 SPINT3P49223 89 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 OVGP1Q12889 678 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 PPP1R7Q15435 360 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 KYAT3Q6YP21 454 aaKnown RBP24.45■■□□□ 1.5
VEGFA-209ENST00000425836 ZNF572Q7Z3I7 529 aaPredicted RBP24.45■■□□□ 1.5
VEGFA-209ENST00000425836 NRSN1Q8IZ57 195 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 PLA2G15Q8NCC3 412 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 KIF18AQ8NI77 898 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 KLHDC7BQ96G42 594 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 KRT12Q99456 494 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 PIH1D1Q9NWS0 290 aaKnown RBP24.45■■□□□ 1.5
VEGFA-209ENST00000425836 CD84Q9UIB8 345 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 ANKRD6Q9Y2G4 727 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 OTOGLQ3ZCN5 2332 aa24.45■■□□□ 1.5
VEGFA-209ENST00000425836 TRPM6Q9BX84 2022 aa24.44■■□□□ 1.5
VEGFA-209ENST00000425836 A6NNZ2 444 aa24.44■■□□□ 1.5
VEGFA-209ENST00000425836 TLR4O00206 839 aa24.44■■□□□ 1.5
VEGFA-209ENST00000425836 SLC4A1P02730 911 aa24.44■■□□□ 1.5
VEGFA-209ENST00000425836 PCCBP05166 539 aa24.44■■□□□ 1.5
VEGFA-209ENST00000425836 PFN3P60673 137 aa24.44■■□□□ 1.5
VEGFA-209ENST00000425836 KIF19Q2TAC6 998 aa24.44■■□□□ 1.5
VEGFA-209ENST00000425836 Q6ZSR6 202 aa24.44■■□□□ 1.5
VEGFA-209ENST00000425836 GLT6D1Q7Z4J2 308 aa24.44■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms