RNA–Protein interactions for RNA: ENST00000425319.1

HLA-DQB3-203, Transcript of major histocompatibility complex, class II, DQ beta 3, humanhuman

BASIC

Gene HLA-DQB3, Length 356 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB3-203ENST00000425319 PRPSAP2O60256 369 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 BUB1BO60566 1050 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ECEL1O95672 775 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 FGF1P05230 155 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SLC2A4P14672 509 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ITGB6P18564 788 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 VIPR1P32241 457 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ETV5P41161 510 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 GPR1P46091 355 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 GNPDA1P46926 289 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 COPB1P53618 953 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TLE1Q04724 770 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 KCNAB2Q13303 367 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 LBRQ14739 615 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NCAPHQ15003 741 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RAB6CQ53S08 254 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 COLEC12Q5KU26 742 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ARTNQ5T4W7 220 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RAET1GQ6H3X3 334 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ACAD10Q6JQN1 1059 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TMEM71Q6P5X7 295 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 FAM129CQ86XR2 697 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ZNF564Q8TBZ8 553 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NKD1Q969G9 470 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CELF6Q96J87 481 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SLC38A3Q99624 504 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 AGPAT1Q99943 283 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MAGEB5Q9BZ81 275 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SLC39A8Q9C0K1 460 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 KLC2Q9H0B6 622 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RAB6CQ9H0N0 254 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NUP62CLQ9H1M0 184 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NOL6Q9H6R4 1146 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 LRRC19Q9H756 370 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 GPN2Q9H9Y4 310 aaPredicted RBP12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 FOXJ2Q9P0K8 574 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 AP4E1Q9UPM8 1137 aa12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NYNRINQ9P2P1 1898 aaKnown RBP12.27□□□□□ -0.45
HLA-DQB3-203ENST00000425319 FLNBO75369 2602 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 IGHV5-10-1A0A0J9YXX1 117 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PSMD11O00231 422 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SOCS5O75159 536 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PRKCGP05129 697 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CCL4P13236 92 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 FERP16591 822 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CHRNB2P17787 502 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PSMA2P25787 234 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ARL4AP40617 200 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ACTR1BP42025 376 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ACTR1AP61163 376 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CYP4F2P78329 520 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NFKB2Q00653 900 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SQSTM1Q13501 440 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 UBAP2LQ14157 1087 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 C16orf72Q14CZ0 275 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RALGPS1Q5JS13 557 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SLC30A9Q6PML9 568 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CEACAM20Q6UY09 585 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 USP45Q70EL2 814 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ATCAYQ86WG3 371 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 HEATR4Q86WZ0 1026 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PTRH1Q86Y79 214 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PSTKQ8IV42 348 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 AVL9Q8NBF6 648 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ENOX1Q8TC92 643 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ART4Q93070 314 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ECHDC3Q96DC8 303 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CCDC74BQ96LY2 380 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CLSTN2Q9H4D0 955 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 SPATS2LQ9NUQ6 558 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 DNPEPQ9ULA0 475 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 HELZ2Q9BYK8 2649 aaKnown RBP12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ZNF462Q96JM2 2506 aa12.26□□□□□ -0.45
HLA-DQB3-203ENST00000425319 B4E171 279 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CASC3O15234 703 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 DUX1O43812 170 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RAD1O60671 282 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ASMTLO95671 621 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CPP00450 1065 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 FGF3P11487 239 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ERCC2P18074 760 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CA4P22748 312 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TEAD1P28347 426 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 CD1CP29017 333 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 UGT1A3P35503 534 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 TSPAN7P41732 249 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 HCAR3P49019 387 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 EPHB1P54762 984 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 MAZP56270 477 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 POLE2P56282 527 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 LRP8Q14114 963 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 DPCR1Q3MIW9 517 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 PPP6R3Q5H9R7 873 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 DPY19L2P1Q6NXN4 242 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RFX8Q6ZV50 586 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 ZNF438Q7Z4V0 828 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NLGN4XQ8N0W4 816 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 RCBTB1Q8NDN9 531 aa12.25□□□□□ -0.45
HLA-DQB3-203ENST00000425319 NLGN4YQ8NFZ3 816 aaPredicted RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms