RNA–Protein interactions for RNA: ENST00000425280.1

LDB1-202, Transcript of LIM domain binding 1, humanhuman

TSL 5 BASIC

Gene LDB1, Length 2,089 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-202ENST00000425280 ZYG11AQ6WRX3 759 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 OR2AP1Q8NGE2 309 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 IGSF5Q9NSI5 407 aa26.52■■□□□ 1.84
LDB1-202ENST00000425280 TARM1B6A8C7 271 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 BMP1P13497 986 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 TBC1D1Q86TI0 1168 aaPredicted RBP26.51■■□□□ 1.83
LDB1-202ENST00000425280 OTUB2Q96DC9 234 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 LRRC37BQ96QE4 947 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 MYLK2Q9H1R3 596 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 MAGEE1Q9HCI5 957 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 FKBPLQ9UIM3 349 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 ZNF711Q9Y462 761 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 STX7O15400 261 aaKnown RBP26.51■■□□□ 1.83
LDB1-202ENST00000425280 FSBPO95073 299 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 PMLP29590 882 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 ARRB2P32121 409 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 NRIP1P48552 1158 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 RPL26P61254 145 aaKnown RBP26.51■■□□□ 1.83
LDB1-202ENST00000425280 SETDB1Q15047 1291 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 DUSP6Q16828 381 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 FAM45BPQ6NSW5 357 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 TMC5Q6UXY8 1006 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 ATG14Q6ZNE5 492 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 TTC8Q8TAM2 541 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 FAM45AQ8TCE6 357 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 HEXDCQ8WVB3 486 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 ISG20Q96AZ6 181 aaKnown RBP26.51■■□□□ 1.83
LDB1-202ENST00000425280 LRRC3BQ96PB8 259 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 UNKQ9C0B0 810 aaKnown RBP26.51■■□□□ 1.83
LDB1-202ENST00000425280 BPIFA1Q9NP55 256 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 OXSMQ9NWU1 459 aa26.51■■□□□ 1.83
LDB1-202ENST00000425280 CORO1CQ9ULV4 474 aaPredicted RBP26.51■■□□□ 1.83
LDB1-202ENST00000425280 RPL26L1Q9UNX3 145 aaKnown RBP26.51■■□□□ 1.83
LDB1-202ENST00000425280 SOCS5O75159 536 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 WISP3O95389 354 aaPredicted RBP26.5■■□□□ 1.83
LDB1-202ENST00000425280 ALPIP09923 528 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 C22orf39Q6P5X5 142 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 CCDC91Q7Z6B0 441 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 RYBPQ8N488 228 aaPredicted RBP26.5■■□□□ 1.83
LDB1-202ENST00000425280 VOPP1Q96AW1 172 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 ATP13A3Q9H7F0 1226 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 GPAMQ9HCL2 828 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 INTS10Q9NVR2 710 aaKnown RBP26.5■■□□□ 1.83
LDB1-202ENST00000425280 MARK1Q9P0L2 795 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 XPR1Q9UBH6 696 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 MARCOQ9UEW3 520 aaPredicted RBP26.5■■□□□ 1.83
LDB1-202ENST00000425280 TRIM13O60858 407 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 KITP10721 976 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 ABCE1P61221 599 aaKnown RBP26.5■■□□□ 1.83
LDB1-202ENST00000425280 SNRPD1P62314 119 aaKnown RBP26.5■■□□□ 1.83
LDB1-202ENST00000425280 BNIP1Q12981 228 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 NAPRTQ6XQN6 538 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 ZNF557Q8N988 423 aaPredicted RBP26.5■■□□□ 1.83
LDB1-202ENST00000425280 ERP27Q96DN0 273 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 SORT1Q99523 831 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 SLC25A13Q9UJS0 675 aa26.5■■□□□ 1.83
LDB1-202ENST00000425280 FDXRP22570 491 aa26.49■■□□□ 1.83
LDB1-202ENST00000425280 CSHL1Q14406 222 aa26.49■■□□□ 1.83
LDB1-202ENST00000425280 LYSMD3Q7Z3D4 306 aa26.49■■□□□ 1.83
LDB1-202ENST00000425280 CELF5Q8N6W0 485 aaKnown RBP26.49■■□□□ 1.83
LDB1-202ENST00000425280 VN1R2Q8NFZ6 395 aa26.49■■□□□ 1.83
LDB1-202ENST00000425280 EID2BQ96D98 161 aa26.49■■□□□ 1.83
LDB1-202ENST00000425280 UBXN10Q96LJ8 280 aa26.49■■□□□ 1.83
LDB1-202ENST00000425280 KCNK4Q9NYG8 393 aa26.49■■□□□ 1.83
LDB1-202ENST00000425280 IL17CQ9P0M4 197 aa26.49■■□□□ 1.83
LDB1-202ENST00000425280 SLC9A3R1O14745 358 aaPredicted RBP26.48■■□□□ 1.83
LDB1-202ENST00000425280 MC4RP32245 332 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 CDKN1CP49918 316 aaPredicted RBP26.48■■□□□ 1.83
LDB1-202ENST00000425280 TIAL1Q01085 375 aaKnown RBP eCLIP26.48■■□□□ 1.83
LDB1-202ENST00000425280 HSF5Q4G112 596 aaPredicted RBP26.48■■□□□ 1.83
LDB1-202ENST00000425280 ADIPOR2Q86V24 386 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 PIM3Q86V86 326 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 SREK1Q8WXA9 508 aaKnown RBP26.48■■□□□ 1.83
LDB1-202ENST00000425280 SCG3Q8WXD2 468 aaKnown RBP26.48■■□□□ 1.83
LDB1-202ENST00000425280 GPR63Q9BZJ6 419 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 DNAJC16Q9Y2G8 782 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 NUP210Q8TEM1 1887 aaPredicted RBP26.48■■□□□ 1.83
LDB1-202ENST00000425280 H7C0S8 307 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 PAPLNO95428 1278 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 CCDC166P0CW27 439 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 ECT2LQ008S8 904 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 PEX6Q13608 980 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 DMC1Q14565 340 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 FAM83EQ2M2I3 478 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 MYLK3Q32MK0 819 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 TMEM207Q6UWW9 146 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 NAT16Q8N8M0 369 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 GDPD5Q8WTR4 605 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 ANKRD49Q8WVL7 239 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 RSPRY1Q96DX4 576 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 TCF12Q99081 682 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 MRPL57Q9BQC6 102 aaKnown RBP26.48■■□□□ 1.83
LDB1-202ENST00000425280 PBX4Q9BYU1 374 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 MRPL46Q9H2W6 279 aaKnown RBP26.48■■□□□ 1.83
LDB1-202ENST00000425280 HEY2Q9UBP5 337 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 SLCO3A1Q9UIG8 710 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 NUMBLQ9Y6R0 609 aa26.48■■□□□ 1.83
LDB1-202ENST00000425280 A0A0J9YYE9 177 aa26.47■■□□□ 1.83
LDB1-202ENST00000425280 H2AFYO75367 372 aaKnown RBP26.47■■□□□ 1.83
LDB1-202ENST00000425280 TRBC1P01850 177 aa26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms