RNA–Protein interactions for RNA: ENST00000425049.1

SHANK2-207, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 4

Gene SHANK2, Length 557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-207ENST00000425049 DTD2Q96FN9 168 aa16.59■□□□□ 0.25
SHANK2-207ENST00000425049 SCRN2Q96FV2 425 aa16.59■□□□□ 0.25
SHANK2-207ENST00000425049 COQ10AQ96MF6 247 aa16.59■□□□□ 0.25
SHANK2-207ENST00000425049 CHP1Q99653 195 aa16.59■□□□□ 0.25
SHANK2-207ENST00000425049 MAK16Q9BXY0 300 aaKnown RBP16.59■□□□□ 0.25
SHANK2-207ENST00000425049 FGF22Q9HCT0 170 aa16.59■□□□□ 0.25
SHANK2-207ENST00000425049 PCDHB1Q9Y5F3 818 aa16.59■□□□□ 0.25
SHANK2-207ENST00000425049 A0A087WV48 116 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 TMEM202A6NGA9 273 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 TNFRSF10CO14798 259 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 USP12O75317 370 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 TCEA3O75764 348 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 MYCLP1P12525 358 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-207ENST00000425049 CCNB1P14635 433 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 TGM2P21980 687 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 KDELR1P24390 212 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 ETV3P41162 512 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 ABCG1P45844 678 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 GABREP78334 506 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 GBE1Q04446 702 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 SPIDRQ14159 915 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 RAET1GQ6H3X3 334 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 CCDC13Q8IYE1 715 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 LSMEM2Q8N112 164 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 OR1E3Q8WZA6 343 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 GRAMD1AQ96CP6 724 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 HDAC11Q96DB2 347 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 TSGA13Q96PP4 275 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 MCCC1Q96RQ3 725 aaPredicted RBP16.58■□□□□ 0.24
SHANK2-207ENST00000425049 RBM15Q96T37 977 aaKnown RBP eCLIP16.58■□□□□ 0.24
SHANK2-207ENST00000425049 CCDC3Q9BQI4 270 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 TRIM5Q9C035 493 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 CYP4F12Q9HCS2 524 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 DNPEPQ9ULA0 475 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 LRRK1Q38SD2 2015 aa16.58■□□□□ 0.24
SHANK2-207ENST00000425049 URB1O60287 2271 aaKnown RBP16.58■□□□□ 0.24
SHANK2-207ENST00000425049 ZFYVE26Q68DK2 2539 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 SHROOM3Q8TF72 1996 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 KRT1P04264 644 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 GM2AP17900 193 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 LHCGRP22888 699 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 TRIM23P36406 574 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 DSC2Q02487 901 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 ISXQ2M1V0 245 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 PERM1Q5SV97 790 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 HSD11B1LQ7Z5J1 315 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 HEATR4Q86WZ0 1026 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 PQLC3Q8N755 202 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 OR6C4Q8NGE1 309 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 RAPGEF5Q92565 580 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 FGF11Q92914 225 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 RNF157Q96PX1 679 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 SUDS3Q9H7L9 328 aaPredicted RBP16.57■□□□□ 0.24
SHANK2-207ENST00000425049 CARS2Q9HA77 564 aaKnown RBP16.57■□□□□ 0.24
SHANK2-207ENST00000425049 MRPL40Q9NQ50 206 aaKnown RBP16.57■□□□□ 0.24
SHANK2-207ENST00000425049 HEY1Q9Y5J3 304 aa16.57■□□□□ 0.24
SHANK2-207ENST00000425049 PRSS38A1L453 326 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 ZNF487B1APH4 448 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 APOL1O14791 398 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 SPOPO43791 374 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 MTA2O94776 668 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 MPOP05164 745 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 HLA-DQB2P05538 268 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 TNNT1P13805 278 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 ZFXP17010 805 aaPredicted RBP16.56■□□□□ 0.24
SHANK2-207ENST00000425049 ZNF30P17039 623 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 SLC1A1P43005 524 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 TBC1D25Q3MII6 688 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 LRRC66Q68CR7 880 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 ALG1LQ6GMV1 187 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 Q6ZVL8 140 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 TSPAN33Q86UF1 283 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 PDZD3Q86UT5 571 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 FAM46DQ8NEK8 389 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 SNIP1Q8TAD8 396 aaKnown RBP16.56■□□□□ 0.24
SHANK2-207ENST00000425049 KIAA1524Q8TCG1 905 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 PIH1D2Q8WWB5 315 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 CCDC74AQ96AQ1 378 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 LGR4Q9BXB1 951 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 TDRD1Q9BXT4 1180 aaKnown RBP16.56■□□□□ 0.24
SHANK2-207ENST00000425049 POLR1BQ9H9Y6 1135 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 DTLQ9NZJ0 730 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 INTUQ9ULD6 942 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 MYLKQ15746 1914 aa16.56■□□□□ 0.24
SHANK2-207ENST00000425049 A0A0J9YYE9 177 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 CAPN8A6NHC0 703 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 B4DGG1 531 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 PPP1R12AO14974 1030 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-207ENST00000425049 TLX3O43711 291 aaPredicted RBP16.55■□□□□ 0.24
SHANK2-207ENST00000425049 TRBC1P01850 177 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 PYGLP06737 847 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 PDHA1P08559 390 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 EIF2S3P41091 472 aaKnown RBP16.55■□□□□ 0.24
SHANK2-207ENST00000425049 GPR1P46091 355 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 RPL26P61254 145 aaKnown RBP16.55■□□□□ 0.24
SHANK2-207ENST00000425049 CDK3Q00526 305 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 AP1B1Q10567 949 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 ILF3Q12906 894 aaKnown RBP eCLIP16.55■□□□□ 0.24
SHANK2-207ENST00000425049 PDK1Q15118 436 aa16.55■□□□□ 0.24
SHANK2-207ENST00000425049 C3orf38Q5JPI3 329 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 71.6 ms