RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 CSTF3Q12996 717 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 GRAPQ13588 217 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 NEDD9Q14511 834 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SQLEQ14534 574 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 EFTUD2Q15029 972 aaKnown RBP eCLIP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 RRS1Q15050 365 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 NPY5RQ15761 445 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 GSTA3Q16772 222 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CCDC142Q17RM4 750 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SLC9B1Q4ZJI4 515 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ZNF789Q5FWF6 425 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 KRT79Q5XKE5 535 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 PLA2G4FQ68DD2 849 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ABLIM2Q6H8Q1 611 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 MOXD1Q6UVY6 613 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 C15orf39Q6ZRI6 1047 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 LRRC55Q6ZSA7 311 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 RHOUQ7L0Q8 258 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ARMCX2Q7L311 632 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 HAUS6Q7Z4H7 955 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 MRGPREQ86SM8 312 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 IQCHQ86VS3 1027 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 GAS2L3Q86XJ1 694 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 PDSS2Q86YH6 399 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ELMOD2Q8IZ81 293 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SCYL3Q8IZE3 742 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ZCCHC7Q8N3Z6 543 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 RASGEF1CQ8N431 466 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 NHLRC2Q8NBF2 726 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 TSPAN14Q8NG11 270 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 OR7G3Q8NG95 312 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 OR8K5Q8NH50 307 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 RAPGEF4Q8WZA2 1011 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ZKSCAN4Q969J2 545 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SLAMF9Q96A28 289 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 TMEM186Q96B77 213 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 DHX58Q96C10 678 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 C19orf60Q96EN9 201 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 C11orf24Q96F05 449 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 EDC3Q96F86 508 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 MASTLQ96GX5 879 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 HES6Q96HZ4 224 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ATP6V1G3Q96LB4 118 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ADAD1Q96M93 576 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 TCEANC2Q96MN5 208 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 INTS14Q96SY0 518 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SSX3Q99909 188 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CPPED1Q9BRF8 314 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CARD6Q9BX69 1037 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CCSER1Q9C0I3 900 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 POLR1EQ9GZS1 481 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ENKD1Q9H0I2 346 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 C11orf54Q9H0W9 315 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 CARD9Q9H257 536 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 TMEM206Q9H813 350 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 TUFT1Q9NNX1 390 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 NGBQ9NPG2 151 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 RPRD1BQ9NQG5 326 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 FSCN3Q9NQT6 498 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 DNAJC17Q9NVM6 304 aaKnown RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ARHGEF38Q9NXL2 777 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 WSB2Q9NYS7 404 aaPredicted RBP3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ERAP1Q9NZ08 941 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 OGFRQ9NZT2 677 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 XPR1Q9UBH6 696 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 FBXL17Q9UF56 701 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 FBXW2Q9UKT8 454 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 NENFQ9UMX5 172 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 GABRQQ9UN88 632 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SNX6Q9UNH7 406 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SORCS3Q9UPU3 1222 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 TNFSF13BQ9Y275 285 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 NAALAD2Q9Y3Q0 740 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 RAD54BQ9Y620 910 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 SPACA6W5XKT8 324 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 ZMYM3Q14202 1370 aa3.76□□□□□ -1.81
SF3B1-205ENST00000424674 PCSK5Q92824 1860 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 KIF7Q2M1P5 1343 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 RNF123Q5XPI4 1314 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 TRBV2A0A0J9YWF9 115 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 FAM230AA0A1W2PPH8 454 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 SMIM30A4D0T7 59 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 NCF1BA6NI72 391 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 MBD3L5A6NJ08 208 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 ACOD1A6NK06 481 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 TBKBP1A7MCY6 615 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 NCF1CA8MVU1 366 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 H0Y8G0 127 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 NDUFS8O00217 210 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 TRIM24O15164 1050 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CLDN3O15551 220 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 HOXA3O43365 443 aaPredicted RBP3.75□□□□□ -1.81
SF3B1-205ENST00000424674 SSX5O60225 188 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PAGE4O60829 102 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 TADA2AO75478 443 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 PRAMEF12O95522 483 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 CER1O95813 267 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 MT-ATP6P00846 226 aa3.75□□□□□ -1.81
SF3B1-205ENST00000424674 TGFAP01135 160 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms