RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 KCNMB4Q86W47 210 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 PPP1R3BQ86XI6 285 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 FAM186BQ8IYM0 893 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 PDILTQ8N807 584 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 OR7D4Q8NG98 312 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 ZNF507Q8TCN5 953 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 GRHL3Q8TE85 626 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 WNT2BQ93097 391 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 MR1Q95460 341 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 C14orf79Q96F83 325 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 CNDP1Q96KN2 507 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 MAGEB10Q96LZ2 347 aaPredicted RBP6.32□□□□□ -1.4
SDCBP-203ENST00000424270 RUFY1Q96T51 708 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 PSMB7Q99436 277 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 WDR26Q9H7D7 661 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 DDIT4Q9NX09 232 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 GOLGA6AQ9NYA3 693 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 C5AR2Q9P296 337 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 SERTAD1Q9UHV2 236 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 LIMCH1Q9UPQ0 1083 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 NTNG1Q9Y2I2 539 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 OR51B4Q9Y5P0 310 aa6.32□□□□□ -1.4
SDCBP-203ENST00000424270 TNFRSF10CO14798 259 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 AREL1O15033 823 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 KLHL41O60662 606 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SPAG6O75602 509 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 CEACAM4O75871 244 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 RHOBTB3O94955 611 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 MAP3K6O95382 1288 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 POP4O95707 220 aaKnown RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 STSP08842 583 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 TRIM49P0CI25 452 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 TRIM49CP0CI26 452 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 VDRP11473 427 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 ESRRAP11474 423 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 BMP6P22004 513 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 ERCC5P28715 1186 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 LIG3P49916 1009 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SMSP52788 366 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 ANAPC15P60006 121 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SH3BP2P78314 561 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 CLDN10P78369 228 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 CDK17Q00537 523 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 AMPD3Q01432 767 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SLC20A2Q08357 652 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 FOXD4Q12950 439 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SQSTM1Q13501 440 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 IL11RAQ14626 422 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 KNOP1Q1ED39 458 aaKnown RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 ANO6Q4KMQ2 910 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SYPL2Q5VXT5 272 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 FAAH2Q6GMR7 532 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 PMF1Q6P1K2 205 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 DOK6Q6PKX4 331 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 MEX3BQ6ZN04 569 aaKnown RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 MED25Q71SY5 747 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 BIVMQ86UB2 503 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 LAPTM4BQ86VI4 370 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 PLXDC1Q8IUK5 500 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 NAGSQ8N159 534 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SCML4Q8N228 414 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 TTC30BQ8N4P2 665 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 ARFGAP1Q8N6T3 406 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 TMEM102Q8N9M5 508 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 CLEC1AQ8NC01 280 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 PLA2G15Q8NCC3 412 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 CPLX3Q8WVH0 158 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 FUBP1Q96AE4 644 aaKnown RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 HMCESQ96FZ2 354 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 CCDC120Q96HB5 630 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SMAD5Q99717 465 aaKnown RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 PRMT1Q99873 361 aaKnown RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 BACH2Q9BYV9 841 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 BRD8Q9H0E9 1235 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 PDE7BQ9NP56 450 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SLC39A2Q9NP94 309 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 SEMA3GQ9NS98 782 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 FGF21Q9NSA1 209 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 OLAHQ9NV23 265 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 HPCAL4Q9UM19 191 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 FARSAQ9Y285 508 aaKnown RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 TBC1D30Q9Y2I9 924 aa6.31□□□□□ -1.4
SDCBP-203ENST00000424270 ZSCAN21Q9Y5A6 473 aaPredicted RBP6.31□□□□□ -1.4
SDCBP-203ENST00000424270 PRRC2CQ9Y520 2896 aaKnown RBP6.3□□□□□ -1.4
SDCBP-203ENST00000424270 JRKO75564 520 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 IPO13O94829 963 aaKnown RBP6.3□□□□□ -1.4
SDCBP-203ENST00000424270 ADRA1BP35368 520 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 NASPP49321 788 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-203ENST00000424270 ARL4DP49703 201 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 VAV2P52735 878 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 GEMIN4P57678 1058 aaKnown RBP6.3□□□□□ -1.4
SDCBP-203ENST00000424270 KCNK10P57789 538 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 CTBSQ01459 385 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 HHEXQ03014 270 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 Q0VFX4 171 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 MTA1Q13330 715 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 ZNF235Q14590 738 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 MYLK3Q32MK0 819 aa6.3□□□□□ -1.4
SDCBP-203ENST00000424270 ATXN7L2Q5T6C5 722 aaPredicted RBP6.3□□□□□ -1.4
SDCBP-203ENST00000424270 TMEM198Q66K66 360 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms