RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 PDGFDQ9GZP0 370 aaPredicted RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 AKTIPQ9H8T0 292 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 MAGEE1Q9HCI5 957 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 INTS10Q9NVR2 710 aaKnown RBP15.25■□□□□ 0.03
C9orf3-204ENST00000424143 SLC2A6Q9UGQ3 507 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 B3GNT3Q9Y2A9 372 aa15.25■□□□□ 0.03
C9orf3-204ENST00000424143 MROH6A6NGR9 719 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 ANGPT2O15123 496 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 CPNE6O95741 557 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 ALDOCP09972 364 aaKnown RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 GFAPP14136 432 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 LBPP18428 481 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 SLC6A2P23975 617 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 PCSK1P29120 753 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 EPHX2P34913 555 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 RFC2P35250 354 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 SERPINH1P50454 418 aaKnown RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 TMBIM6P55061 237 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 ADAM17P78536 824 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 PLOD1Q02809 727 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 ACVR1Q04771 509 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 FSCN1Q16658 493 aaKnown RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 GJC2Q5T442 439 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 RBM20Q5T481 1227 aaKnown RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 KANK2Q63ZY3 851 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 DUS1LQ6P1R4 473 aaKnown RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 BLOC1S3Q6QNY0 202 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 LINC00299Q6ZSB3 139 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 RAB44Q7Z6P3 723 aaPredicted RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 TAC4Q86UU9 113 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 CILP2Q8IUL8 1156 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 DCP1BQ8IZD4 617 aaKnown RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 ZNF786Q8N393 782 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 DHRSXQ8N5I4 330 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 SMG8Q8ND04 991 aaKnown RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 DQX1Q8TE96 717 aaKnown RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 ITPKCQ96DU7 683 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 COX4I2Q96KJ9 171 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 FSD1LQ9BXM9 530 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 SEZ6LQ9BYH1 1024 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 RPF2Q9H7B2 306 aaKnown RBP15.24■□□□□ 0.03
C9orf3-204ENST00000424143 RBM22Q9NW64 420 aaKnown RBP eCLIP15.24■□□□□ 0.031e-10■■■□□ 17.4
C9orf3-204ENST00000424143 IPPQ9Y573 584 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 MYLKQ15746 1914 aa15.24■□□□□ 0.03
C9orf3-204ENST00000424143 TCRBV5S2A0A599 114 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 SOBPA7XYQ1 873 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 CLOCKO15516 846 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 SNAI1O95863 264 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 S1PR4O95977 384 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 MT-CYBP00156 380 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 HLA-DQB2P05538 268 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 PRR35P0CG20 571 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 ADCYAP1R1P41586 468 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 ENTPD1P49961 510 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 CRYBB1P53674 252 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 WNT3AP56704 352 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 PHEXP78562 749 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 ADARB1P78563 741 aaKnown RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 TMED1Q13445 227 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 CCNYL2Q5T2Q4 361 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 OSCP1Q8WVF1 389 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 TADA1Q96BN2 335 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 LRRC58Q96CX6 371 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 IMP4Q96G21 291 aaKnown RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 OTUD5Q96G74 571 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 PCED1BQ96HM7 432 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 CELF6Q96J87 481 aaKnown RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 RDH12Q96NR8 316 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 OSMRQ99650 979 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 NUSAP1Q9BXS6 441 aaKnown RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 SLC39A8Q9C0K1 460 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 CCDC68Q9H2F9 335 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 RNF39Q9H2S5 420 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 TFB2MQ9H5Q4 396 aaKnown RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 ELP3Q9H9T3 547 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 PFDN4Q9NQP4 134 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 CMTM6Q9NX76 183 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 SMPD3Q9NY59 655 aaPredicted RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 PKD2L2Q9NZM6 624 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 GNPTGQ9UJJ9 305 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 PIN4Q9Y237 131 aaKnown RBP15.23■□□□□ 0.03
C9orf3-204ENST00000424143 TLL2Q9Y6L7 1015 aa15.23■□□□□ 0.03
C9orf3-204ENST00000424143 PLXNB2O15031 1838 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 A0A1W2PP18 115 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 CCDC78A2IDD5 438 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 DFFAO00273 331 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 PTGESO14684 152 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 AZIN1O14977 448 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 IRAK2O43187 625 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 BAIAP3O94812 1187 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 ESRRBO95718 433 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 F2P00734 622 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 HDCP19113 662 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 FDXRP22570 491 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 FGFR3P22607 806 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 PDCD4Q53EL6 469 aaKnown RBP15.22■□□□□ 0.03
C9orf3-204ENST00000424143 ISLR2Q6UXK2 745 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 GPRIN1Q7Z2K8 1008 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 PROSER1Q86XN7 944 aa15.22■□□□□ 0.03
C9orf3-204ENST00000424143 CMTR2Q8IYT2 770 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms