RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 VAT1Q99536 393 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 APOOQ9BUR5 198 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 DUSP23Q9BVJ7 150 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 OSBPL8Q9BZF1 889 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 SLC25A51Q9H1U9 297 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 WDR26Q9H7D7 661 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 SAE1Q9UBE0 346 aaPredicted RBP10.96□□□□□ -0.65
USP49-204ENST00000423567 SPASTQ9UBP0 616 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 APOBEC3BQ9UH17 382 aaKnown RBP10.96□□□□□ -0.65
USP49-204ENST00000423567 CHKBQ9Y259 395 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 EFR3BQ9Y2G0 817 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 PPIL1Q9Y3C6 166 aa10.96□□□□□ -0.65
USP49-204ENST00000423567 SPTBN2O15020 2390 aa10.96□□□□□ -0.66
USP49-204ENST00000423567 KNL1Q8NG31 2342 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 GOLGA6CA6NDK9 693 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 GOLGA6BA6NDN3 693 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 GOLGA6L3A6NEY3 463 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 CAPN8A6NHC0 703 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 H7C0C1 242 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 SCAMP1O15126 338 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 AQP9O43315 295 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ZNF189O75820 626 aaPredicted RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 STK10O94804 968 aaKnown RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 TJP3O95049 919 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 RASGRP1O95267 797 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ALPIP09923 528 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 CCDC175P0C221 793 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ATXN1LP0C7T5 689 aaKnown RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 GOLGA6DP0CG33 693 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 CTSEP14091 401 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 TSHRP16473 764 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 PTPN3P26045 913 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 PTPN7P35236 360 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ETV3P41162 512 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ATP5OP48047 213 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 DAB2P98082 770 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 EIF2B5Q13144 721 aaKnown RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 ZNF211Q13398 564 aaPredicted RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 XRCC4Q13426 336 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 SLC14A2Q15849 920 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 LRRC66Q68CR7 880 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ESRP1Q6NXG1 681 aaKnown RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 PNCKQ6P2M8 343 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ENPP7Q6UWV6 458 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 B4GALNT4Q76KP1 1039 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 KANSL1Q7Z3B3 1105 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 HID1Q8IV36 788 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 PHACTR4Q8IZ21 702 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 SLC25A45Q8N413 288 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 CNTD1Q8N815 330 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 PNPLA1Q8N8W4 532 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ZNF548Q8NEK5 533 aaPredicted RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 OR4C6Q8NH72 309 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 CCHCR1Q8TD31 782 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 LMX1AQ8TE12 382 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 UBE2Q2Q8WVN8 375 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 HTR3CQ8WXA8 447 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ADAMTS14Q8WXS8 1223 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 DTD2Q96FN9 168 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 TEKT5Q96M29 485 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 COQ10AQ96MF6 247 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 WDR92Q96MX6 357 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 QKIQ96PU8 341 aaKnown RBP eCLIP10.95□□□□□ -0.665e-8■■■■■ 29.9
USP49-204ENST00000423567 RBM15Q96T37 977 aaKnown RBP eCLIP10.95□□□□□ -0.66
USP49-204ENST00000423567 MLPHQ9BV36 600 aaPredicted RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 GLOD4Q9HC38 313 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 PHPT1Q9NRX4 125 aaPredicted RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 UCKL1Q9NWZ5 548 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 GOLGA6AQ9NYA3 693 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 NLGN3Q9NZ94 848 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 KLHL8Q9P2G9 620 aaPredicted RBP10.95□□□□□ -0.66
USP49-204ENST00000423567 TRIM10Q9UDY6 481 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 KLQ9UEF7 1012 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 GUCA1BQ9UMX6 200 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 DOLKQ9UPQ8 538 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 OR1A2Q9Y585 309 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 PCDHGA1Q9Y5H4 931 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 ADGRG1Q9Y653 693 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 CSNK1G3Q9Y6M4 447 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 NCOR2Q9Y618 2525 aa10.95□□□□□ -0.66
USP49-204ENST00000423567 DNAH14Q0VDD8 3507 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 C1orf232A0A0U1RR37 186 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 SIGLEC6O43699 453 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 HYAL3O43820 417 aaPredicted RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 RFPL3O75679 317 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 FTCDO95954 541 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 PYGLP06737 847 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 HOXC4P09017 264 aaPredicted RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 C1SP09871 688 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 CKMT2P17540 419 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 LHCGRP22888 699 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 DUSP3P51452 185 aaPredicted RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 KIAA1024LP59773 190 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 SRP54P61011 504 aaKnown RBP10.94□□□□□ -0.66
USP49-204ENST00000423567 SKOR1P84550 965 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 CDK18Q07002 472 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 ADCY2Q08462 1091 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 ELOCQ15369 112 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 PCSK7Q16549 785 aa10.94□□□□□ -0.66
USP49-204ENST00000423567 PRRT3Q5FWE3 981 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms