RNA–Protein interactions for RNA: ENST00000423271.7

USB1-202, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,217 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-202ENST00000423271 ATL2Q8NHH9 583 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 SNIP1Q8TAD8 396 aaKnown RBP15.21■□□□□ 0.03
USB1-202ENST00000423271 SLC35G2Q8TBE7 412 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 GLMNQ92990 594 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 NUS1Q96E22 293 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 SEMA3CQ99985 751 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 CCDC3Q9BQI4 270 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 ZNF670Q9BS34 389 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 WDR26Q9H7D7 661 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 GULP1Q9UBP9 304 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 INTUQ9ULD6 942 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 PADI4Q9UM07 663 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 TFR2Q9UP52 801 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 PCDHA13Q9Y5I0 950 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 DGKBQ9Y6T7 804 aa15.21■□□□□ 0.03
USB1-202ENST00000423271 ATRXP46100 2492 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 A0A1W2PNU3 283 aaPredicted RBP15.2■□□□□ 0.02
USB1-202ENST00000423271 A0A1W2PQ67 120 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 TNFP01375 233 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 PDHA1P08559 390 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 CTPS1P17812 591 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 TRIM23P36406 574 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 ETV3P41162 512 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 ABCG1P45844 678 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 GABREP78334 506 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 GBE1Q04446 702 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 ISXQ2M1V0 245 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 TBC1D25Q3MII6 688 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 RALGPS1Q5JS13 557 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 ARMC12Q5T9G4 340 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 PNCKQ6P2M8 343 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 GKN2Q86XP6 184 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 LRRC49Q8IUZ0 686 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 SFTPA2Q8IWL1 248 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.2■□□□□ 0.02
USB1-202ENST00000423271 ACRBPQ8NEB7 543 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 OR56A4Q8NGH8 313 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 MAML1Q92585 1016 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 NAT6Q93015 286 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 FAF2Q96CS3 445 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 DTD2Q96FN9 168 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 MCCC1Q96RQ3 725 aaPredicted RBP15.2■□□□□ 0.02
USB1-202ENST00000423271 RBM15Q96T37 977 aaKnown RBP eCLIP15.2■□□□□ 0.02
USB1-202ENST00000423271 SYNDIG1Q9H7V2 258 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 RABGEF1Q9UJ41 708 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 PHTF1Q9UMS5 762 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 GPR34Q9UPC5 381 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 REXO2Q9Y3B8 237 aaKnown RBP15.2■□□□□ 0.02
USB1-202ENST00000423271 RAI2Q9Y5P3 530 aa15.2■□□□□ 0.02
USB1-202ENST00000423271 PMS2P1A4D2B8 440 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 KRT7P08729 469 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 CYP2A6P11509 494 aaPredicted RBP15.19■□□□□ 0.02
USB1-202ENST00000423271 MAN1A1P33908 653 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 PDX1P52945 283 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 DSC2Q02487 901 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 ITKQ08881 620 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 SLC10A2Q12908 348 aaPredicted RBP15.19■□□□□ 0.02
USB1-202ENST00000423271 MESDQ14696 234 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 PDK2Q15119 407 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 LVRNQ6Q4G3 990 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 RBM44Q6ZP01 1051 aaKnown RBP15.19■□□□□ 0.02
USB1-202ENST00000423271 RFLNAQ6ZTI6 216 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 HEATR4Q86WZ0 1026 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 RHOT2Q8IXI1 618 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 CBARPQ8N350 705 aaPredicted RBP15.19■□□□□ 0.02
USB1-202ENST00000423271 PIH1D2Q8WWB5 315 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 SCG3Q8WXD2 468 aaKnown RBP15.19■□□□□ 0.02
USB1-202ENST00000423271 RAPGEF5Q92565 580 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 FGF11Q92914 225 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 CCDC74AQ96AQ1 378 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 ATXN7L3BQ96GX2 97 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 POLR1EQ9GZS1 481 aaKnown RBP15.19■□□□□ 0.02
USB1-202ENST00000423271 TMEM168Q9H0V1 697 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 MOSPD1Q9UJG1 213 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 TTLL3Q9Y4R7 772 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 ENTPD2Q9Y5L3 495 aa15.19■□□□□ 0.02
USB1-202ENST00000423271 ARHGEF17Q96PE2 2063 aaPredicted RBP15.19■□□□□ 0.02
USB1-202ENST00000423271 RCCD1A6NED2 376 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 MATN3O15232 486 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 FZD6O60353 706 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 MTA2O94776 668 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 IPO7O95373 1038 aaKnown RBP15.18■□□□□ 0.02
USB1-202ENST00000423271 HLA-DQB2P05538 268 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 HOXC4P09017 264 aaPredicted RBP15.18■□□□□ 0.02
USB1-202ENST00000423271 MYCLP1P12525 358 aaPredicted RBP15.18■□□□□ 0.02
USB1-202ENST00000423271 KELP23276 732 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 ACTN2P35609 894 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 IFI16Q16666 785 aaKnown RBP15.18■□□□□ 0.02
USB1-202ENST00000423271 C3orf38Q5JPI3 329 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 FAM182AQ5T1J6 154 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 ZFYVE27Q5T4F4 411 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 ALG1LQ6GMV1 187 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 Q6ZVL8 140 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 USP45Q70EL2 814 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 CCL4L1Q8NHW4 92 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 TPCN2Q8NHX9 752 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 PTCD2Q8WV60 388 aaKnown RBP15.18■□□□□ 0.02
USB1-202ENST00000423271 SCRN2Q96FV2 425 aa15.18■□□□□ 0.02
USB1-202ENST00000423271 SUDS3Q9H7L9 328 aaPredicted RBP15.18■□□□□ 0.02
USB1-202ENST00000423271 POLR1BQ9H9Y6 1135 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms