RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 PDE2AO00408 941 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-206ENST00000423161 NOBOXO60393 691 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 HEXIM1O94992 359 aaKnown RBP18.5■□□□□ 0.55
SREBF1-206ENST00000423161 MYCLP1P12525 358 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-206ENST00000423161 GLB1P16278 677 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 NFKBIAP25963 317 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 SERPINB6P35237 376 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 UGT1A5P35504 534 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 MAXP61244 160 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 TRAF2Q12933 501 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 EIF3IQ13347 325 aaKnown RBP18.5■□□□□ 0.55
SREBF1-206ENST00000423161 TSR1Q2NL82 804 aaKnown RBP18.5■□□□□ 0.55
SREBF1-206ENST00000423161 C14orf28Q4W4Y0 310 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 CERCAMQ5T4B2 595 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 HGSNATQ68CP4 663 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 SPECC1LQ69YQ0 1117 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 TXNRD3NBQ6F5E7 133 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 OGFOD3Q6PK18 319 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 RAB11FIP2Q7L804 512 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 SFTPA2Q8IWL1 248 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 FBXO39Q8N4B4 442 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 NIPA2Q8N8Q9 360 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 Q8N9G6 341 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-206ENST00000423161 CCL4L1Q8NHW4 92 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 NSMCE1Q8WV22 266 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 BTBD6Q96KE9 485 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 TMEM74Q96NL1 305 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 THAP2Q9H0W7 228 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 DPEP2Q9H4A9 486 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 PHPT1Q9NRX4 125 aaPredicted RBP18.5■□□□□ 0.55
SREBF1-206ENST00000423161 KCTD5Q9NXV2 234 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 ANAPC7Q9UJX3 599 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 APPL1Q9UKG1 709 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 PHTF1Q9UMS5 762 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 SSUH2Q9Y2M2 353 aa18.5■□□□□ 0.55
SREBF1-206ENST00000423161 BZW2Q9Y6E2 419 aaKnown RBP18.5■□□□□ 0.55
SREBF1-206ENST00000423161 CYP2A6P11509 494 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-206ENST00000423161 CCKBRP32239 447 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 MMP13P45452 471 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 CDH6P55285 790 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 SLC25A11Q02978 314 aaKnown RBP18.49■□□□□ 0.55
SREBF1-206ENST00000423161 MARC1Q5VT66 337 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 SPRED1Q7Z699 444 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 HEATR4Q86WZ0 1026 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 JAMLQ86YT9 394 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 DTD2Q96FN9 168 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 FUCA2Q9BTY2 467 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 NUP85Q9BW27 656 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 SUDS3Q9H7L9 328 aaPredicted RBP18.49■□□□□ 0.55
SREBF1-206ENST00000423161 CARS2Q9HA77 564 aaKnown RBP18.49■□□□□ 0.55
SREBF1-206ENST00000423161 EIF2AK3Q9NZJ5 1116 aaKnown RBP18.49■□□□□ 0.55
SREBF1-206ENST00000423161 IP6K2Q9UHH9 426 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 RNF215Q9Y6U7 377 aa18.49■□□□□ 0.55
SREBF1-206ENST00000423161 A0A1W2PQJ5 194 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 NPIPB15A6NHN6 443 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-206ENST00000423161 HGFP14210 728 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 PNLIPP16233 465 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 LHCGRP22888 699 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 SLC5A2P31639 672 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 ETV3P41162 512 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 CFHR1Q03591 330 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 CLN3Q13286 438 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 ARHGEF7Q14155 803 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 HLTFQ14527 1009 aaKnown RBP eCLIP18.48■□□□□ 0.55
SREBF1-206ENST00000423161 KRT81Q14533 505 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 RALGPS1Q5JS13 557 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 HSD11B1LQ7Z5J1 315 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 ZNF843Q8N446 348 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 KIAA1524Q8TCG1 905 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 SNRNP27Q8WVK2 155 aaKnown RBP18.48■□□□□ 0.55
SREBF1-206ENST00000423161 SYN2Q92777 582 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-206ENST00000423161 TEX101Q9BY14 249 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 LRIT1Q9P2V4 623 aa18.48■□□□□ 0.55
SREBF1-206ENST00000423161 ATXN7L1Q9ULK2 861 aaPredicted RBP18.48■□□□□ 0.55
SREBF1-206ENST00000423161 GOLGA6CA6NDK9 693 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 GOLGA6BA6NDN3 693 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 K7ENP7 123 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 PSMD11O00231 422 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 NUDT21O43809 227 aaKnown RBP18.47■□□□□ 0.55
SREBF1-206ENST00000423161 PGLSO95336 258 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 SERPING1P05155 500 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 GOLGA6DP0CG33 693 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 CCNB1P14635 433 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 SSR1P43307 286 aaKnown RBP18.47■□□□□ 0.55
SREBF1-206ENST00000423161 TPM4P67936 248 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 FANCCQ00597 558 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 ZSCAN23Q3MJ62 389 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 ARMC12Q5T9G4 340 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 RAET1GQ6H3X3 334 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 INO80CQ6PI98 192 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-206ENST00000423161 USP45Q70EL2 814 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 GPBAR1Q8TDU6 330 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 SCRN2Q96FV2 425 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 FRMD8Q9BZ67 464 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-206ENST00000423161 NT5MQ9NPB1 228 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 WDR70Q9NW82 654 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 GOLGA6AQ9NYA3 693 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 RCOR3Q9P2K3 495 aaPredicted RBP18.47■□□□□ 0.55
SREBF1-206ENST00000423161 PISDQ9UG56 409 aa18.47■□□□□ 0.55
SREBF1-206ENST00000423161 PCDHGA7Q9Y5G6 932 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms