RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 CORO1BQ9BR76 489 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 C2orf49Q9BVC5 232 aaPredicted RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 MRPL46Q9H2W6 279 aaKnown RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 CATSPERZQ9NTU4 200 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 DLGAP2Q9P1A6 1054 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 LZTS1Q9Y250 596 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 PCDHGA4Q9Y5G9 962 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 IRAK3Q9Y616 596 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 MTCL1Q9Y4B5 1905 aaKnown RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 C2orf71A6NGG8 1288 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 TK2O00142 265 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 CCL22O00626 93 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 FCHO1O14526 889 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 AURKAO14965 403 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 ZSCAN9O15535 394 aaPredicted RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 BUD23O43709 281 aaKnown RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 TLL1O43897 1013 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 GREM1O60565 184 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 ZMPSTE24O75844 475 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 FGF19O95750 216 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 S1PR4O95977 384 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 LINC00271P0C7V0 271 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 OGNP20774 298 aaKnown RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 CTNNB1P35222 781 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 CSKP41240 450 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 ZXDBP98169 803 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 USP4Q13107 963 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 ZNF460Q14592 562 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 CFAP157Q5JU67 520 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 RBM20Q5T481 1227 aaKnown RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 PSRC1Q6PGN9 363 aaPredicted RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 NCEH1Q6PIU2 408 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 MFSD6LQ8IWD5 586 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 CENPLQ8N0S6 344 aaPredicted RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 DCAF4L2Q8NA75 395 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 OR13C4Q8NGS5 318 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 MIPOL1Q8TD10 442 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 PDCD6IPQ8WUM4 868 aaKnown RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 BHMTQ93088 406 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 ACDQ96AP0 544 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 CDKN2AIPNLQ96HQ2 116 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 NDNQ99608 321 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 LRRC3Q9BY71 257 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 ILKAPQ9H0C8 392 aaPredicted RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 TLE6Q9H808 572 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 GPAMQ9HCL2 828 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 NLE1Q9NVX2 485 aaPredicted RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 KIAA1522Q9P206 1035 aaPredicted RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 PDP2Q9P2J9 529 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 VPS51Q9UID3 782 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 APOBEC2Q9Y235 224 aaKnown RBP9.05□□□□□ -0.96
SNX20-203ENST00000423026 PCDHGC4Q9Y5F7 938 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 SLC4A7Q9Y6M7 1214 aa9.05□□□□□ -0.96
SNX20-203ENST00000423026 CCDC162PA2VCL2 907 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 OR51F1A6NGY5 319 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 ANKRD66B4E2M5 251 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 GFRA2O00451 464 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 PFDN6O15212 129 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 CCL16O15467 120 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 CBX6O95503 412 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 RBP1P09455 135 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 LTA4HP09960 611 aaKnown RBP9.04□□□□□ -0.96
SNX20-203ENST00000423026 LPOP22079 712 aaPredicted RBP9.04□□□□□ -0.96
SNX20-203ENST00000423026 BMPR1AP36894 532 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 SLC26A3P40879 764 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 LBX1P52954 281 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 EPHB1P54762 984 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 ERVFC1P60507 584 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 CSHL1Q14406 222 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 TBCCQ15814 346 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 ZNF789Q5FWF6 425 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 PLPP4Q5VZY2 271 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 FAM91A1Q658Y4 838 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 AFTPHQ6ULP2 937 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 RTL10Q7L3V2 364 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 METTL3Q86U44 580 aaKnown RBP9.04□□□□□ -0.96
SNX20-203ENST00000423026 BBS7Q8IWZ6 715 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 MRPL43Q8N983 215 aaKnown RBP9.04□□□□□ -0.96
SNX20-203ENST00000423026 OR6Y1Q8NGX8 325 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 CCDC126Q96EE4 140 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 SORT1Q99523 831 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 GATA5Q9BWX5 397 aaPredicted RBP9.04□□□□□ -0.96
SNX20-203ENST00000423026 PIDD1Q9HB75 910 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 INTS10Q9NVR2 710 aaKnown RBP9.04□□□□□ -0.96
SNX20-203ENST00000423026 PNPOQ9NVS9 261 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 DNAJC28Q9NX36 388 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 HACD3Q9P035 362 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 XPR1Q9UBH6 696 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 LNPEPQ9UIQ6 1025 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 G3BP2Q9UN86 482 aaKnown RBP9.04□□□□□ -0.96
SNX20-203ENST00000423026 SORCS3Q9UPU3 1222 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 RWDD3Q9Y3V2 267 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 OR51B4Q9Y5P0 310 aa9.04□□□□□ -0.96
SNX20-203ENST00000423026 MAGEA13PA6NCF6 341 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 PALM2-AKAP2B1ALY0 433 aaPredicted RBP9.03□□□□□ -0.96
SNX20-203ENST00000423026 LEFTY2O00292 366 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 CD160O95971 181 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 PRLP01236 227 aa9.03□□□□□ -0.96
SNX20-203ENST00000423026 SERPINA6P08185 405 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms