RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 COQ6Q9Y2Z9 468 aa17.01■□□□□ 0.31
COL7A1-202ENST00000422991 FRYLO94915 3013 aa17.01■□□□□ 0.31
COL7A1-202ENST00000422991 RIF1Q5UIP0 2472 aaKnown RBP17.01■□□□□ 0.31
COL7A1-202ENST00000422991 MEI4A8MW99 385 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 AURKAO14965 403 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 TM7SF2O76062 418 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 RHOBTB1O94844 696 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 CLDN7O95471 211 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 C1SP09871 688 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 NUDT1P36639 197 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 PTGER3P43115 390 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 PTSQ03393 145 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 MORF4L2Q15014 288 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 AGERQ15109 404 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 SETMARQ53H47 684 aaPredicted RBP17■□□□□ 0.31
COL7A1-202ENST00000422991 PRR23BQ6ZRT6 265 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 ARMCX6Q7L4S7 300 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 HSD11B1LQ7Z5J1 315 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 DNAAF3Q8N9W5 541 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 MCUQ8NE86 351 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 ASB12Q8WXK4 309 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 SNX19Q92543 992 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 KLK6Q92876 244 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 EID2BQ96D98 161 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 CFAP54Q96N23 3096 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 ORAI3Q9BRQ5 295 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 EBF2Q9HAK2 575 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 ZFYVE1Q9HBF4 777 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 SNX24Q9Y343 169 aa17■□□□□ 0.31
COL7A1-202ENST00000422991 UTP11Q9Y3A2 253 aaKnown RBP17■□□□□ 0.31
COL7A1-202ENST00000422991 TP73O15350 636 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 LZTS3O60299 673 aaPredicted RBP16.99■□□□□ 0.31
COL7A1-202ENST00000422991 SLC4A1P02730 911 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 TPH1P17752 444 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 DHPSP49366 369 aaPredicted RBP16.99■□□□□ 0.31
COL7A1-202ENST00000422991 ITGA8P53708 1063 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 SARNPP82979 210 aaKnown RBP16.99■□□□□ 0.31
COL7A1-202ENST00000422991 SLC7A5Q01650 507 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 CREB5Q02930 508 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 ACOX1Q15067 660 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 GLE1Q53GS7 698 aaKnown RBP16.99■□□□□ 0.31
COL7A1-202ENST00000422991 LYSMD4Q5XG99 296 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 DENND2CQ68D51 928 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 HIBCHQ6NVY1 386 aaPredicted RBP16.99■□□□□ 0.31
COL7A1-202ENST00000422991 LRRC8BQ6P9F7 803 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 GLT6D1Q7Z4J2 308 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 TMC3Q7Z5M5 1100 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 CAND1Q86VP6 1230 aaKnown RBP16.99■□□□□ 0.31
COL7A1-202ENST00000422991 BRSK1Q8TDC3 778 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 SLC17A9Q9BYT1 436 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 GPR63Q9BZJ6 419 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 DPH5Q9H2P9 285 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 XAB2Q9HCS7 855 aaKnown RBP16.99■□□□□ 0.31
COL7A1-202ENST00000422991 DMTF1Q9Y222 760 aa16.99■□□□□ 0.31
COL7A1-202ENST00000422991 FAM186AA6NE01 2351 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 A0A1W2PPC4 97 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 BHMG1C9JSJ3 638 aaPredicted RBP16.98■□□□□ 0.31
COL7A1-202ENST00000422991 GOLGA8MH3BSY2 632 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 SMAPO00193 183 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 AP3B1O00203 1094 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 NDC80O14777 642 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 RECQL5O94762 991 aaPredicted RBP16.98■□□□□ 0.31
COL7A1-202ENST00000422991 MLNP12872 115 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 CD27P26842 260 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 HMGCLP35914 325 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 ETV3P41162 512 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 SGCGQ13326 291 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 POU6F1Q14863 301 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 TAF1AQ15573 450 aaPredicted RBP16.98■□□□□ 0.31
COL7A1-202ENST00000422991 WDR45BQ5MNZ6 344 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 CERCAMQ5T4B2 595 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 CYP2U1Q7Z449 544 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 TECPR1Q7Z6L1 1165 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 RAVER1Q8IY67 606 aaKnown RBP16.98■□□□□ 0.31
COL7A1-202ENST00000422991 BBOF1Q8ND07 529 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 DENND6BQ8NEG7 585 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 DNASE2BQ8WZ79 361 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 SEC14L1Q92503 715 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 DTD2Q96FN9 168 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 SERPINB12Q96P63 405 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 C1QTNF7Q9BXJ2 289 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 GRHL1Q9NZI5 618 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.98■□□□□ 0.31
COL7A1-202ENST00000422991 WHRNQ9P202 907 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 EIF2B4Q9UI10 523 aaKnown RBP16.98■□□□□ 0.31
COL7A1-202ENST00000422991 SMG5Q9UPR3 1016 aaKnown RBP16.98■□□□□ 0.31
COL7A1-202ENST00000422991 ARL5AQ9Y689 179 aa16.98■□□□□ 0.31
COL7A1-202ENST00000422991 WNT9AO14904 365 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 RAD51BO15315 384 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 SLC31A1O15431 190 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 LDB2O43679 373 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 CRTAMO95727 393 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 PAK4O96013 591 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 HNRNPA2B1P22626 353 aaKnown RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 ITPKAP23677 461 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 MAGEA3P43357 314 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 SPINT3P49223 89 aa16.97■□□□□ 0.31
COL7A1-202ENST00000422991 ZNF140P52738 457 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 SESN2P58004 480 aaPredicted RBP16.97■□□□□ 0.31
COL7A1-202ENST00000422991 SEPT6Q14141 434 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms