RNA–Protein interactions for RNA: ENST00000420996.2

UPF3AP3-201, Transcript of UPF3A pseudogene 3, humanhuman

BASIC

Gene UPF3AP3, Length 769 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP3-201ENST00000420996 SPOCK2Q92563 424 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 PCMTD1Q96MG8 357 aaPredicted RBP16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 GSDMCQ9BYG8 508 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 DHX35Q9H5Z1 703 aaKnown RBP16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 CARS2Q9HA77 564 aaKnown RBP16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 SP110Q9HB58 689 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 PHPT1Q9NRX4 125 aaPredicted RBP16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 KCTD5Q9NXV2 234 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 SDK2Q58EX2 2172 aa16.88■□□□□ 0.29
UPF3AP3-201ENST00000420996 STMND1H3BQB6 276 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 DFFAO00273 331 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 DAPK3O43293 454 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 CEACAM5P06731 702 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 CCL4P13236 92 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 ERCC2P18074 760 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 GPR3P46089 330 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 RENBPP51606 427 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 CYP4F2P78329 520 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 ILF3Q12906 894 aaKnown RBP eCLIP16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 CA9Q16790 459 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 NUS1Q96E22 293 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 NSMCE3Q96MG7 304 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 PSKH2Q96QS6 385 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 TAAR9Q96RI9 348 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 NUDT22Q9BRQ3 303 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 FUCA2Q9BTY2 467 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 TEX101Q9BY14 249 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 GEMIN8Q9NWZ8 242 aaKnown RBP16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 TRNAU1APQ9NX07 287 aaKnown RBP16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 TAAR2Q9P1P5 351 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 B4GALT6Q9UBX8 382 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 BOD1L1Q8NFC6 3051 aa16.87■□□□□ 0.29
UPF3AP3-201ENST00000420996 IGHV5-10-1A0A0J9YXX1 117 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 A0A1W2PQ67 120 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 HTRA2O43464 458 aaPredicted RBP16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 PPFIA2O75334 1257 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 ECEL1O95672 775 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 FUCA1P04066 466 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 FGF3P11487 239 aaPredicted RBP16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 CD1CP29017 333 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 COPB1P53618 953 aaKnown RBP16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 ARHGAP36Q6ZRI8 547 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 RFX8Q6ZV50 586 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 HEATR4Q86WZ0 1026 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 SNRNP25Q9BV90 132 aaKnown RBP16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 SLC12A9Q9BXP2 914 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 FRMD8Q9BZ67 464 aaPredicted RBP16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 SLC25A18Q9H1K4 315 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 SUDS3Q9H7L9 328 aaPredicted RBP16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 FANCLQ9NW38 375 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 SEPT3Q9UH03 358 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 PCDHGA3Q9Y5H0 932 aa16.86■□□□□ 0.29
UPF3AP3-201ENST00000420996 LGALS16A8MUM7 142 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 CCDC172P0C7W6 258 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 PSMA2P25787 234 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 VIPR1P32241 457 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 HCAR3P49019 387 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 ATP1A2P50993 1020 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 LIMK2P53671 638 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 MAMLD1Q13495 774 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 SQSTM1Q13501 440 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 TRA2AQ13595 282 aaKnown RBP eCLIP16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 PEX6Q13608 980 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 LBRQ14739 615 aaKnown RBP16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 CLCA4Q14CN2 919 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 CNGA3Q16281 694 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 PPP1R2P3Q6NXS1 205 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 CBARPQ8N350 705 aaPredicted RBP16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 ARFGAP1Q8N6T3 406 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 NPWQ8N729 165 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 RCBTB1Q8NDN9 531 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 ANKRD20A12PQ8NF67 263 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 JPH3Q8WXH2 748 aaPredicted RBP16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 NKD1Q969G9 470 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 CCDC74BQ96LY2 380 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 ZNF599Q96NL3 588 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 ERGIC2Q96RQ1 377 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 PEBP4Q96S96 227 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 KCTD15Q96SI1 283 aaPredicted RBP16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 ADNPQ9H2P0 1102 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 PARVAQ9NVD7 372 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 LIMA1Q9UHB6 759 aaKnown RBP16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 PCSK1NQ9UHG2 260 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 SUFUQ9UMX1 484 aa16.85■□□□□ 0.29
UPF3AP3-201ENST00000420996 MAST4O15021 2626 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 SPTA1P02549 2419 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 SOCS5O75159 536 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 RNF8O76064 485 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 HEXIM1O94992 359 aaKnown RBP16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 FERP16591 822 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 NFKBIAP25963 317 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 AK4P27144 223 aaPredicted RBP16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 TEAD1P28347 426 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 GNPDA1P46926 289 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 ARSDP51689 593 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 ZNF135P52742 658 aaPredicted RBP16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 CDK3Q00526 305 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 UBXN1Q04323 297 aa16.84■□□□□ 0.29
UPF3AP3-201ENST00000420996 SLC10A7Q0GE19 358 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms